Team:LMU-Munich/ProSearch

From 2010.igem.org

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[[Image:prosearchZelle.jpg|300px|Logo|right]]
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==ProSearch System==
==ProSearch System==
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<html>
<html>
<body>
<body>
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<form action="/cgi-bin/getTF.cgi" method="get">
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<form action="http://ka0.org/igem/getTF.cgi" method="get">  
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<p>Condition<br> <p>Specific Gene (leave empty for all):<br><input type="text" name="gene" size="50" maxlength="50"></p>
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<p>Condition<br>  
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<SELECT NAME="condition">
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<SELECT NAME="condition">  
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<OPTION VALUE="RCAS-beta-cateinS37A">RCAS-beta-cateinS37A</OPTION>
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<OPTION VALUE="beta-catenin">bCatenin treatment</OPTION>  
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<OPTION VALUE="Conduritol B Epoxide">Conduritol B Epoxide</OPTION>  
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<OPTION VALUE="conduritolB">conduritol B treatment</OPTION>  
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<OPTION VALUE="Gammaherpesvirus">Gammaherpesvirus</OPTION>  
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<OPTION VALUE="gHerpes">gHerpes infection</OPTION>  
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<OPTION VALUE="HIV Integration">HIV Integration</OPTION>
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<OPTION VALUE="hiv">HIV infection</OPTION>  
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<OPTION VALUE="HLTV-1 p30">HLTV-1 p30</OPTION>  
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<OPTION VALUE="hypoxia">hypoxia</OPTION>  
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<OPTION VALUE="Hypoxia">Hypoxia</OPTION>
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<OPTION VALUE="htlv">HTLV infection</OPTION>  
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</SELECT>
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</SELECT>  
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<p>Specific Gene (leave empty for all):<br><input type="text" name="gene" size="50" maxlength="50"></p>  
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<!-- SearchBar -->
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<p><input type="submit" value="Send Query"></p>  
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    <div class="search">Search:</label>
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</form>  
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<option value="/sites/gquery" resource="gquery">All Databases</option>
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<option value="/pubmed" resource="pubmed">PubMed</option>
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</select></div>
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<div class="search_bottom"><input name="EntrezSystem2.PEntrez.Protein.Entrez_SearchBar.Term" sid="1" type="text" id="search_term" value="" title="Search Protein" cmd="Go" class="jig-ncbiautocomplete" config="isEnabled:false,disableUrl:'EntrezSearchBarAutoComplCtrl'" autocomplete="off" suggest="true" /><button name="EntrezSystem2.PEntrez.Protein.Entrez_SearchBar.Search" sid="1" id="search" class="button_search" cmd="go">Search</button><button name="EntrezSystem2.PEntrez.Protein.Entrez_SearchBar.Clear" sid="1" id="Clear" class="button_clear">Clear</button></div><div class="search_extras"><ul class="inline_list"><li><a name="EntrezSystem2.PEntrez.Protein.Entrez_SearchBar.LimitsLink" sid="1" onclick="return false;" href="/protein/limits" id="EntrezSystem2.PEntrez.Protein.Entrez_SearchBar.LimitsLink">Limits</a></li><li><a name="EntrezSystem2.PEntrez.Protein.Entrez_SearchBar.Advanced" sid="1" onclick="return false;" href="/protein/advanced" id="EntrezSystem2.PEntrez.Protein.Entrez_SearchBar.Advanced">Advanced search</a></li><li><a name="Help" href="/bookshelf/br.fcgi?book=helpentrez&amp;part=EntrezHelp#EntrezHelp.Entrez__the_Life_Sci" target="_blank" id="Help">Help</a></li></ul></div><input name="EntrezSystem2.PEntrez.Protein.Entrez_SearchBar.CurrDb" sid="1" type="hidden" value="protein" /><script type="text/javascript">
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var d = document.getElementById('search_term');
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if (d) {d.focus();}
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</script></div>
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<p>Specific Gene (leave empty for all):<br><input type="text" name="gene" size="50" maxlength="50"></p>
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<p><input type="submit" value="Send Query"></p>
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</form>
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</body>
</body>
</html>
</html>
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Latest revision as of 14:43, 25 October 2010


Logo



ProSearch System

This system is to search for new enhancer-promoter combinations that efficiently trigger gene expression in response to different stimuli. This part of the project is carried out through a bioinformatic modeling process. The end-product is a databank of related genes, their promoters and transcription factors at the input of a wished environmental condition. This system is useful for the construction of new inducible systems trying to utilize apoptosis or other gene expression in the human cell-line 293T.

Retrieve Genes, their Promoters and Transcription Factors for a specific condition

Condition

Specific Gene (leave empty for all):
 

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