Team:HokkaidoU Japan/Protocols
From 2010.igem.org
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- | == | + | ==Preparation of Competent cells (''E. coli'' DH5a)== |
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<div class="acc-content"> | <div class="acc-content"> | ||
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===Reagents=== | ===Reagents=== | ||
'''TB (Transformation Buffer)(at 4C, filtration)''' | '''TB (Transformation Buffer)(at 4C, filtration)''' | ||
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# freeze the suspension in liquid nitrogen | # freeze the suspension in liquid nitrogen | ||
# store at -80C | # store at -80C | ||
- | + | </div></div> | |
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+ | <li> | ||
==Bacterial Transformations== | ==Bacterial Transformations== | ||
+ | <div class="acc-section"> | ||
+ | <div class="acc-content"> | ||
+ | </div></dvi> | ||
+ | </li> | ||
+ | <li> | ||
==Mini-prep (Alkaline SDS Method)== | ==Mini-prep (Alkaline SDS Method)== | ||
+ | <div class="acc-section"><div class="acc-content">a</div></dvi></li><li> | ||
==PCR== | ==PCR== | ||
+ | <div class="acc-section"><div class="acc-content">b</div></dvi></li><li> | ||
==Restriction Enzyme Digestions== | ==Restriction Enzyme Digestions== | ||
+ | <div class="acc-section"><div class="acc-content">c</div></dvi></li><li> | ||
==DNA ligation== | ==DNA ligation== | ||
+ | <div class="acc-section"><div class="acc-content">d</div></dvi></li><li> | ||
==Agarose gel electrophoresis== | ==Agarose gel electrophoresis== | ||
+ | <div class="acc-section"><div class="acc-content">e</div></dvi></li><li> | ||
==Electroporation== | ==Electroporation== | ||
+ | <div class="acc-section"><div class="acc-content">f</div></dvi></li></ul> | ||
<html> | <html> |
Revision as of 16:32, 21 September 2010
Protocols
-
Preparation of Competent cells (E. coli DH5a)
Reagents
TB (Transformation Buffer)(at 4C, filtration)
Final concentration 1 M CaCl2 (at RT, autoclaved) 0.75 mL 15 mM 4 M KCl (at RT, autoclaved) 3.125 mL 250 mM 1 M MnCl2 (at 4C, autoclaved) 2.75 mL 55 mM 1 M PIPES (pH 6.7 by NaOH, at 4C, filtration) 0.5 mL 10 mM Total 50 mL filtration (0.2 um), store at 4C
Method
- Single colony isolation on LB plate
- incubate the plate for 15-19 hrs at 37C
- lift a colony into 2 mL of LB
- culture cells at 37C for 12-16 hrs at 180-200 rpm
- transfer 30 uL, 100 uL, 300 uL of the culture into 100 mL SOB medium, respectively
- culture cells at 20C (for 24 hrs over) at 180-200 rpm (to ΔOD550nm = 0.5~0.6)
- leave the 300 mL flask for 10 min on ice
- transfer the culture into two 50 mL Falcon tube
- centrifuge 7500 rpm at 4C for 20 min (TOMY TA-22 rotor), and discard sup
- suspend the pellet in ice-cold 15 mL of TB (Transformation Buffer)(7.5 mL/tube)
- centrifuge 7500 rpm at 4C for 2 min (TOMY TA-22 rotor), and discard sup
- suspend the pellet in ice-cold 3.2 mL of TB
- add 0.24 mL of DMSO (stirring, bit by bit)
- leave the 50 mL Falcon tube for 10 min on ice
- dispense 50 uL into 0.5 mL tube
- freeze the suspension in liquid nitrogen
- store at -80C
-
Bacterial Transformations
</li>
Mini-prep (Alkaline SDS Method)
a</dvi></li>PCR
b</dvi></li>Restriction Enzyme Digestions
c</dvi></li>DNA ligation
d</dvi></li>Agarose gel electrophoresis
e</dvi></li>Electroporation
f</dvi></li></ul>