Team:HokkaidoU Japan/Notebook/September16
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- | + | * put each solutions into 37℃ incubator.1-23L solution was put about a half and two hours,1-14K solution was done about a half and an hour,30ul of pSB1A3 solution was done about an hour,and 50ul of pSB1A3 was done about a half hour. | |
- | + | * electrophoresed each solutions added 6×sample buffer.put 12uls each into wells of a gel. | |
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Revision as of 07:42, 19 September 2010
Digestion of GFP and Double Terminator
Parts Information
GFP | BBa_E0040 | 1-14K | 720bp | pSB1A3 |
double terminator | BBa_B0015 | 1-23L | 129bp | pSB1AK3 |
pSB1A3 | pSB1A3 | - | 2157bp | pSB1A3 |
1-14K and pSB1A3 had purified with mycrocon, and 1-23L had extracted from a gel before.
- electrophoresed 1ul of 1-14K and 1-23L added 0.5ul of 6×sample buffer to estimate concentration of each solution.
- estimated concentration from photo of electrophoresys.But I forgot to electrophorese pSB1A3 solution with the other samples,so pSB1A3 solution was done by other person.
- made digestion recipes based on each concentrations(below). Why pSB1A3 recipe is two, because I firstly made 30ul of pSB1A3 solution, but I found it was insufficient to ligate parts, so I made more 50ul of it after.
1-14K | 200 ng/ul |
1-23L | 120 ng/ul |
pSB1A3 | 2.5 ng/ul |
Digestion Menu
1-23L | 0.5 uL |
10x M buffer | 5 uL |
0.1%BSA | 5 uL |
Xba I | 4 uL |
Pst I | 0.5 uL |
DW | 35 uL |
Total | 50 uL |
1-14K | 1.5 uL |
10x H buffer | 2 uL |
0.1% BSA | 2 uL |
EcoR I | 1 uL |
Spe I | 0.5 uL |
DW | 13 uL |
Total | 20 uL |
pSB1A3 | 20 uL |
10x H buffer | 3 uL |
0.1% BSA | 3 uL |
EcoR I | 0.5 uL |
Pst I | 0.5 uL |
DW | 3 uL |
Total | 30 uL |
pSB1A3 | 30 uL |
10x H buffer | 5 uL |
0.1% BSA | 5 uL |
EcoR I | 0.5 uL |
Pst I | 0.5 uL |
DW | 9 uL |
Total | 30 uL |
- put each solutions into 37℃ incubator.1-23L solution was put about a half and two hours,1-14K solution was done about a half and an hour,30ul of pSB1A3 solution was done about an hour,and 50ul of pSB1A3 was done about a half hour.
- electrophoresed each solutions added 6×sample buffer.put 12uls each into wells of a gel.
1 | λ/HindIII, EcoR I |
2~3 | 1-14K |
4~8 | 1-23L |
9~16 | pSB1A3 |
- cannot see 1-23L because of overflowing.extracted the other samples from a gel.dissolve them with 50ul of Nuclease free water.And they were stocked to freeze in -20℃.