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Team:LMU-Munich/Cut'N'survive/Schedule
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=== Construct 1 === | === Construct 1 === | ||
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| + | [[Image:TEV11.jpg|400pxs|TEV Construct 1: Inserted in celline]] | ||
- transform into HeLa cells to see if they survive. | - transform into HeLa cells to see if they survive. | ||
Revision as of 10:52, 30 August 2010
For PCR key see PCR key
Colourcode for the primers: Annealing part, mutagenised part, other sequences integrated into primer
Primer used: 1TreF 2TreR
expected product size: 492bp
Primer used: 3TevF 4TevMutEPR
expected product size: 332 bp
Primer used: 5TevMutEPF 6TevR
expected product size: 772 bp
Primer used: 3TevF 6TevR
expected product size: 1087 bp
Primer used: 7BakF 8BakMutPR
expected product size: 330 bp
Primer used: 9BakMutPF 10BakR
expected product size: 376 bp
Primer used: 7BakF 10BakR
expected product size: 688 bp
Primer used: 11PAF 12PAR
expected product size: 237 bp
Primer used: 13TrecF 14TrecMutSR
expected product size: 850 bp
Primer used: 15TrecMutSF 16TrecR
expected product size: 402 bp
Primer used: 13TrecF 16TrecR
expected product size: 1233 bp
We are using the 3A System to assemble Biobricks.
Assembling Construct 1
Assembling Construct 2
- transform into HeLa cells to see if they survive.
-> Check the leakiness of tet-on-promoter
- induce tet-on-promoter to see, if cells die.
-> Check if construct 1 is working
- transform into HeLa cells and see if eGFP is being translated
-> Check if CMV-promoter is working and construct is being read-off completely
- Western Blot
-> Check by reference of protein size if eGFP is cut off from the residual of the protein by TEV-Protease
Contents
Aim 1: DNA replication+PCR
PCR1: replication of the Tet-inducible CMV promotor [X]
PCR2a: replication of the TEVrecogn-NDegron-SF3 Part with mutagenisis (EcoR1 + Pst1) [X]
PCR2b: replication of the TEVrecogn-NDegron-SF3 Part with mutagenisis (EcoR1 + Pst1) [X]
PCR3: joining PCR of the TEVrecogn-NDegron-SF3 Part [ ]
PCR4a: replication human bak with mutagenisis (Pst1) [ ]
PCR4b: replication human bak with mutagenisis (Pst1) [ ]
PCR5: joining PCR of human bak [ ]
PCR6: replication of the SV40-polyadenylation site [X]
PCR7a: replication of the p14*TEVrecogn with mutagenisis (Spe1) [ ]
PCR7b: replication of the p14*TEVrecogn with mutagenisis (Spe1) with TEV recogn in primer (16TrecR) [ ]
PCR8: joining PCR of p14*TEVrecogn with TEV recogn in primer (16TrecR) [ ]
Aim 2: Assembling Biobricks
Aim 3: Testing products
Construct 1
Construct 2
Aim 4: Testing system
