Team:Cambridge/Software Tools

From 2010.igem.org

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[http://voigtlab.ucsf.edu/ruby/assembly Primer design for Gibson]
[http://voigtlab.ucsf.edu/ruby/assembly Primer design for Gibson]
===Calculating nucleic acid interactions===
===Calculating nucleic acid interactions===
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[http://mfold.bioinfo.rpi.edu/ Cis-folding of DNA and Rcd (for primer design + Rcd)]
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[http://dinamelt.bioinfo.rpi.edu/hybrid2.php Trans interactions (e.g. Rcd)]
[http://dinamelt.bioinfo.rpi.edu/hybrid2.php Trans interactions (e.g. Rcd)]
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===Codon optimisation===
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[http://genedesign.thruhere.net/cgi-bin/gd/gdCodJug.cgi Codon juggling tool, good compromise?]
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[http://www.genscript.com/cgi-bin/tools/rare_codon_analysis Rare codon analysis]
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[http://genomes.urv.cat/OPTIMIZER/ OPTIMIZER]
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==Downloadable tools==
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[http://www.clcbio.com/ CLC Main Workbench]
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[http://dinamelt.bioinfo.rpi.edu/download.php UNA Fold for linux] offline version of DINAMelt, complex
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<html>
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</div>
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</html>
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Latest revision as of 11:41, 18 August 2010

Retrieved from "http://2010.igem.org/Team:Cambridge/Software_Tools"