Team:Tsinghua/Notebook/17 September 2010

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(Difference between revisions)
(New page: == Module Ⅱ, group 4 == According to the known DNA sequence of OmpA and CBD, design the primer for the following Two-step PCR. primer design: OmpA Upstream primer: TCATCATATGAAA...)
 
Line 8: Line 8:
  Downstream primer:  ACGCCAGTACCTGCAAGCTTTGAGCTCCCTCCTCCAGA
  Downstream primer:  ACGCCAGTACCTGCAAGCTTTGAGCTCCCTCCTCCAGA
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CBD:
+
CBD
-
Upstream primer:      ggagggagctcaAAGCTTGCAGGTACTGGCGTCGTATC
+
Upstream primer:      ggagggagctcaAAGCTTGCAGGTACTGGCGTCGTATC
-
Downstream primer:    ACTGCTCGAGAGTTGAACCGTAAGCAAGAGTTCC
+
Downstream primer:    ACTGCTCGAGAGTTGAACCGTAAGCAAGAGTTCC
NOTE:the downstream primer of OmpA and the upstream primer of CBD will be matching during the PCR, so the Two-step PCR can be realized.
NOTE:the downstream primer of OmpA and the upstream primer of CBD will be matching during the PCR, so the Two-step PCR can be realized.

Latest revision as of 02:56, 28 October 2010

Module Ⅱ, group 4

According to the known DNA sequence of OmpA and CBD, design the primer for the following Two-step PCR.

primer design:

OmpA

Upstream primer:     TCATCATATGAAAGCTACTAAACTGGTACTGG 
Downstream primer:   ACGCCAGTACCTGCAAGCTTTGAGCTCCCTCCTCCAGA

CBD

Upstream primer:      ggagggagctcaAAGCTTGCAGGTACTGGCGTCGTATC
Downstream primer:    ACTGCTCGAGAGTTGAACCGTAAGCAAGAGTTCC

NOTE:the downstream primer of OmpA and the upstream primer of CBD will be matching during the PCR, so the Two-step PCR can be realized.


Order the designed preimers.After getting the primer,Use the K-up and K-do to detect the P+K+C. Meanwhile use the digestion protocol to ensure the result.