Team:USTC Software/teamOverview

From 2010.igem.org

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=Attribution and Contributions=
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No iGEM project is done in a day. It requires good team work for 12 months to achieve it. USTC_Software team is built up by 10 students (7 undergraduates, 3 graduates) and two main instructors. Throughout the summer of 2010, our team members have been working cooperatively with our instructors to realize the idea of iGaME. We also appreciate the help from numerous people caring about USTC Software team. Our thank goes to all the listed and unlisted names on the [[Team:USTC_Software/acknowledgments| Acknowledgments]] page.
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= Team Overview =
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Details about each team member's work are listed below:
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|[[Image:Ustc_software_team_overall.jpg|center|500px|thumb|Team]]
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Instructors:
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This year 10 students started the iGEM '''USTC Software''' team: '''Chen Liao''', '''Zheng Wang''', '''Kun Jiang''', '''Jue Wang''', '''Luojun Wang''', '''Yubo Qi''', '''Zhaoyi Li''', '''Zhengda He''', '''Shangyu Luo''' and '''Mort Yao'''. There are only 8 of us in the picture, while the only female team member, '''Jue Wang''' was in Beijing engaging for her TOEFL exam, and '''Shangyu Luo''' had gone to Hong Kong for studying in The University of Hong Kong as an exchange student. What a pity! But they will join us at the iGEM 2010 Jamboree.
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=='''Zhaofeng Luo'''==
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* Build up the team, organize the early training of iGEM, which includes brainstorming, previous work summary, and basic training on synthetic biology experiments.
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=='''Hao Jiang'''==
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* Brainstorm together with team members, and raise the prototype of Chain-Node Model in the process. Contribute to develop the concept of Chain-Node Model into a complete language of MoDeL. Answering questions for non-biological students. Help with the parameter adjustment in our process of modeling.
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=='''Chen Liao'''==
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* Contribute to develop the concept of Chain-Node Model into a complete language of MoDeL. Construct the automatic modeling algorithm for MoDeL, and finish most of the relevant codes. Cooperate in the structure constructing of MoDeL. Do the modeling of our demos, and related wiki editing.
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=='''Zhen Wang'''==
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* Contribute to develop the concept of Chain-Node Model into a complete language of MoDeL. Construct database examples in MoDeL. Define the syntax and refine the language. Finish the RFC and other documents on MoDeL and edit related wiki pages. Design the User Interface of input process. Cooperate in algorithm developing and modeling.
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=='''Kun Jiang'''==
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* Write codes on DBXML interface, UI and so on. Integrate the core algorithm with Qt, COPASI and DBXML. Take charge of code merging on Github. Design and construct wiki.
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=='''Soimort Yao'''==
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* Cooperate in the design of UI and write relevant codes. Design and construct our wiki.
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=='''Luojun Wang'''==
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* Take charge of our human practice – the C project, and write related wiki contents. Correct grammar errors in documents and wiki pages.
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=='''Jue Wang'''==
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USTC has formed two IGEM teams this year, one wet lab team and one dry lab team. As many students majoring in biology was attracted to the wet lab team, our team consists of students from other departments, such as Mathematics, Physics, Computer Science and so on. Thanks to our instructors '''Hao Jiang''' and '''Zhaofeng Luo''', with their professional instruction, we are guided to decide the project plan, design and implementation.
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* Take charge of trip scheduling, sponsor contact, T-shirt designing, and so on. Write related wiki contents.
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=='''Zhaoyi Li'''==
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* Investigate the work of synchronized E.coli clock and finish the database for it in MoDeL with Zhen Wang. Correct grammar errors in documents and wiki pages.
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__NOTOC__
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== About iGEM@USTC ==
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=='''Yubo Qi'''==
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The iGEM Team of USTC are the combination of the exact tradition of USTC and the exact vitality of the young. Rigorous daily schoolwork has provided the team members with a solid foundation of basic knowledge, and an innovative spirit enables us to stand on the frontier of the modern science.
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* Investigate the work of EPF-Lausanne 2009 and finish the database for it in MoDeL with Zhen Wang and Zhengda He.  
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In 2007, Jian Zhan, Bo Ding, Rui Ma, Xiaoyu Ma, Yun Zhao, Ziqing Liu and Xiaofeng Su, guided by Prof. Haiyan Liu, Prof. Jiarui Wu and Prof. Zhonghuai Hou, won the "Best Foundational Technology Prize" and a Gold Medal, with the project [https://2007.igem.org/USTC "Extensible Logic Circuit in Bacteria"].
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In 2008, Xunyao Wu, He Shen, Genxin Liu, Jia Liu, Binjie Xu, Yanting Xue, Yu Chen, Zhen Xu, Bo Ding and Jian Zhan, guided by Prof. Haiyan Liu, won a [https://igem.org/Results Silver Medal], with the project [https://2008.igem.org/files/presentation/USTC.pdf "Artificial Multi-cellular Self-organization System"].
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In 2009, Hao Jiang, Li Xing, Hao Wu, Zongxiao He, Danqian Liu, Chao Li, Jiayi Dou, Hanyu Lu, Hao Zhou and Bing Wu, guided by Zhaofeng Luo, Jian Zhan, Jiong Hong and Xiaoxiao Ma, won a [https://igem.org/Results Gold Medal], with the project [https://2009.igem.org/Team:USTC "E. coli Automatic Directed Evolution Machine (E.ADEM)"].
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In 2009 we also formed a software team for the first time. Wei Pan, Yuwei Cui, Jiahao Li, Yu He and Xiaomo Yao, guided by Bo Ding, also won a [https://igem.org/Results Gold Medal], with the Project [https://2009.igem.org/Team:USTC_Software "Automatic Biological Circuit Design (ABCD)"].
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''Since last year we have accumulated some experience from the project of Automatic Biological Circuit Design (ABCD), we expect to develop a synthetic biology game this time. The game aims at teaching non-biologists how to design biological systems so that players can compete to improve their designs in order to help biologists create the best engineered machines!''
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''For more information, go to [http://biotech.ustc.edu.cn/forum/forumdisplay.php?fid=26 USTC iGEM Forum].''
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|width="450px" style="padding: 0 20px 15px 15px; background-color:#CCFFFF"|
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== About USTC ==
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* Message from the President
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''A university is the important assurance of maintaining belief, developing science and culture. It is a significant symbol of the level of civilization achieved by a nation.''
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* USTC Today
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''The University of Science and Technology of China is a new type of university established by the Chinese Academy of Sciences (CAS) after the founding of People's Republic of China. The establishment of the University is aimed at fostering high-level personnel of science and technology absolutely necessary for the development of the national economy, national defense construction, and education in science and technology. The University was founded in Beijing in September of 1958. Mr. Guo Moruo is the first president of the University...''
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* History of USTC
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''"Pooling the entire strength of the CAS for the development of USTC and combining the institutes of the CAS with the departments at USTC" "Studying hard and excelling in both integrity and specialty"USTC was established in Beijing in September, 1958 under the presidential leadership of Guo Moruo. The establishment was hailed as "a major event in the history of Chinese science and education"...''
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For more information, please visit [http://en.ustc.edu.cn/ http://en.ustc.edu.cn/] (in English) and [http://www.ustc.edu.cn/ http://www.ustc.edu.cn/] (in Chinese).
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== Team Cooperation ==
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=== '''iGEM 2010 China Meetup Shanghai 5/6th Aug, 2010''' ===
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On August 5th, teams from 7 top universities in China, [https://2010.igem.org/Team:SJTU-BioX-Shanghai SJTU-BioX-Shanghai], [https://2010.igem.org/Team:ECUST-Shanghai ECUST-Shanghai], [https://2010.igem.org/Team:Peking Peking], [https://2010.igem.org/Team:Tsinghua Tsinghua], [https://2010.igem.org/Team:USTC USTC] & [https://2010.igem.org/Team:USTC_Software USTC_Software], [https://2010.igem.org/Team:ZJU-China ZJU-China], and Sun Yat-sen University all gathered in Shanghai and had a nice day at the iGEM 2010 China Meetup.
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The meetup started around 9 with a short speech by Professor Lin He, head of Shanghai Jiao Tong University Bio-X Institute, which hosted the event. Then each team made a presentation displaying their projects and progresses since the summer began, followed by free questioning and discussion time. And when it was near the end of the day, student members had a hour or two to talk and play freely with each other, with a big meal waiting ahead for them.<br/>
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For more information, go to [https://2010.igem.org/Events/China_meetup https://2010.igem.org/Events/China_meetup].
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=='''Zhengda He'''==
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== Gallery ==
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{|
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* Investigate the work of EPF-Lausanne 2009 and finish the database for it in MoDeL with Yubo Qi and Zhen Wang. Summarize some of the previous work briefly. Raise ideas about User Interface.
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=='''Shangyu Luo'''==
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<gallery widths=190px perrow=3>
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Image:USTC_Software_gall_1.jpg
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* Join the brainstorming about MoDeL structure. Investigate on database formats. Summarize useful information from previous work.
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Image:USTC_Software_gall_2.jpg
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Image:USTC_Software_gall_12.jpg
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</gallery>
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Latest revision as of 23:01, 27 October 2010


Team Overview

Team

This year 10 students started the iGEM USTC Software team: Chen Liao, Zheng Wang, Kun Jiang, Jue Wang, Luojun Wang, Yubo Qi, Zhaoyi Li, Zhengda He, Shangyu Luo and Mort Yao. There are only 8 of us in the picture, while the only female team member, Jue Wang was in Beijing engaging for her TOEFL exam, and Shangyu Luo had gone to Hong Kong for studying in The University of Hong Kong as an exchange student. What a pity! But they will join us at the iGEM 2010 Jamboree.

USTC has formed two IGEM teams this year, one wet lab team and one dry lab team. As many students majoring in biology was attracted to the wet lab team, our team consists of students from other departments, such as Mathematics, Physics, Computer Science and so on. Thanks to our instructors Hao Jiang and Zhaofeng Luo, with their professional instruction, we are guided to decide the project plan, design and implementation.

About iGEM@USTC

The iGEM Team of USTC are the combination of the exact tradition of USTC and the exact vitality of the young. Rigorous daily schoolwork has provided the team members with a solid foundation of basic knowledge, and an innovative spirit enables us to stand on the frontier of the modern science.

In 2007, Jian Zhan, Bo Ding, Rui Ma, Xiaoyu Ma, Yun Zhao, Ziqing Liu and Xiaofeng Su, guided by Prof. Haiyan Liu, Prof. Jiarui Wu and Prof. Zhonghuai Hou, won the "Best Foundational Technology Prize" and a Gold Medal, with the project "Extensible Logic Circuit in Bacteria".

In 2008, Xunyao Wu, He Shen, Genxin Liu, Jia Liu, Binjie Xu, Yanting Xue, Yu Chen, Zhen Xu, Bo Ding and Jian Zhan, guided by Prof. Haiyan Liu, won a Silver Medal, with the project "Artificial Multi-cellular Self-organization System".

In 2009, Hao Jiang, Li Xing, Hao Wu, Zongxiao He, Danqian Liu, Chao Li, Jiayi Dou, Hanyu Lu, Hao Zhou and Bing Wu, guided by Zhaofeng Luo, Jian Zhan, Jiong Hong and Xiaoxiao Ma, won a Gold Medal, with the project "E. coli Automatic Directed Evolution Machine (E.ADEM)".

In 2009 we also formed a software team for the first time. Wei Pan, Yuwei Cui, Jiahao Li, Yu He and Xiaomo Yao, guided by Bo Ding, also won a Gold Medal, with the Project "Automatic Biological Circuit Design (ABCD)".

Since last year we have accumulated some experience from the project of Automatic Biological Circuit Design (ABCD), we expect to develop a synthetic biology game this time. The game aims at teaching non-biologists how to design biological systems so that players can compete to improve their designs in order to help biologists create the best engineered machines!

For more information, go to [http://biotech.ustc.edu.cn/forum/forumdisplay.php?fid=26 USTC iGEM Forum].

About USTC

  • Message from the President

A university is the important assurance of maintaining belief, developing science and culture. It is a significant symbol of the level of civilization achieved by a nation.

  • USTC Today

The University of Science and Technology of China is a new type of university established by the Chinese Academy of Sciences (CAS) after the founding of People's Republic of China. The establishment of the University is aimed at fostering high-level personnel of science and technology absolutely necessary for the development of the national economy, national defense construction, and education in science and technology. The University was founded in Beijing in September of 1958. Mr. Guo Moruo is the first president of the University...

  • History of USTC

"Pooling the entire strength of the CAS for the development of USTC and combining the institutes of the CAS with the departments at USTC" "Studying hard and excelling in both integrity and specialty"USTC was established in Beijing in September, 1958 under the presidential leadership of Guo Moruo. The establishment was hailed as "a major event in the history of Chinese science and education"...

For more information, please visit [http://en.ustc.edu.cn/ http://en.ustc.edu.cn/] (in English) and [http://www.ustc.edu.cn/ http://www.ustc.edu.cn/] (in Chinese).

Team Cooperation

iGEM 2010 China Meetup Shanghai 5/6th Aug, 2010

On August 5th, teams from 7 top universities in China, SJTU-BioX-Shanghai, ECUST-Shanghai, Peking, Tsinghua, USTC & USTC_Software, ZJU-China, and Sun Yat-sen University all gathered in Shanghai and had a nice day at the iGEM 2010 China Meetup.
The meetup started around 9 with a short speech by Professor Lin He, head of Shanghai Jiao Tong University Bio-X Institute, which hosted the event. Then each team made a presentation displaying their projects and progresses since the summer began, followed by free questioning and discussion time. And when it was near the end of the day, student members had a hour or two to talk and play freely with each other, with a big meal waiting ahead for them.
For more information, go to https://2010.igem.org/Events/China_meetup.

Gallery

USTC Software gall 1.jpg
USTC Software gall 2.jpg
USTC Software gall 3.jpg
USTC Software gall 4.jpg
USTC Software gall 5.jpg
USTC Software gall 6.jpg
USTC Software gall 7.jpg
USTC Software gall 8.jpg
USTC Software gall 9.jpg
USTC Software gall 10.jpg
USTC Software gall 11.jpg
USTC Software gall 12.jpg
Retrieved from "http://2010.igem.org/Team:USTC_Software/teamOverview"