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Team:UT-Tokyo/Sudoku modeling
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Besides, we treated DNA as continuous variabl, since there could be hundreds of plasmid in one E.coli (multicopy plasmid). | Besides, we treated DNA as continuous variabl, since there could be hundreds of plasmid in one E.coli (multicopy plasmid). | ||
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=='''MS2 phage infection'''== | =='''MS2 phage infection'''== | ||
Revision as of 15:15, 27 October 2010
Sudoku
Introduction System Modeling Lab note Result Reference
4C3leak switch
We modeled our 4C3 leak switch as ODE system.
Variable
Basically, "pn" denotes for protein concentration and "rn" denotes for mRNA concentration
p1,p2,p3,p4 : concentration of 4 recombinase protein
r1,r2,r3,r4 : concentration of 4 recombinass mRNA
pc,rc : concentration of cre recombinase protein and mRNA
ps,rs : concentration of SP6 polymerase protein and mRNA
Besides, we treated DNA as continuous variabl, since there could be hundreds of plasmid in one E.coli (multicopy plasmid).
Equations
Parameters
===
MS2 phage infection
Whole system
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