Team:Tsinghua/Notebook/31 July 2010

From 2010.igem.org

(Difference between revisions)
(New page: == Module I, Group 2c == To solve the problem of severe dimerization of primers, we tried to adjust PCR system and use different concentration of upstream and downstream primers. As the c...)
(Module I, Group 2c)
 
Line 7: Line 7:
PCR system (pyrobest):
PCR system (pyrobest):
   H2O                       17.3ul
   H2O                       17.3ul
-
   5×buffer               2.5μl
+
   10×buffer               2.5μl
   dNTP                       2.5μl
   dNTP                       2.5μl
   primer1               1μl
   primer1               1μl
   primer2               0.5μl
   primer2               0.5μl
   template               1μl
   template               1μl
-
   FastPFU               0.2μl
+
   pyrobest               0.2μl
-
   Total                       20μl
+
   Total                       25μl
   
   
----
----
Result: to my disappoint, after gel purification,target fragments disappeared! What's worse, no PCR product of Chlr is seen in the gel photograph actually.
Result: to my disappoint, after gel purification,target fragments disappeared! What's worse, no PCR product of Chlr is seen in the gel photograph actually.

Latest revision as of 16:58, 26 October 2010

Module I, Group 2c

To solve the problem of severe dimerization of primers, we tried to adjust PCR system and use different concentration of upstream and downstream primers. As the concentration of PCR product is too low to be digested and purification, we attempted to use PCR product got yesterday as the template for PCR today.



PCR system (pyrobest):

 H2O	                       17.3ul
 10×buffer	               2.5μl
 dNTP	                       2.5μl
 primer1	               1μl
 primer2	               0.5μl
 template	               1μl
 pyrobest	               0.2μl
 Total	                       25μl


Result: to my disappoint, after gel purification,target fragments disappeared! What's worse, no PCR product of Chlr is seen in the gel photograph actually.