Team:DTU-Denmark/Team
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<br><h4>Scientific Background</h4> | <br><h4>Scientific Background</h4> | ||
+ | <p align="justify">Christopher Workman is associate professor at the Center of Biological Sequence Analysis (CBS) at DTU. Dr. Workman has nine years of combined biotech industry and post-graduate experience. This includes three years of postdoctoral training in a leading Systems Biology lab at the University of California, San Diego headed by Dr. Trey Ideker. During this period he led a project that resulted in a map of transcriptional regulatory pathways that control the DNA damage response in yeast and a first author publication in Science. Dr. Workman has developed a number of bioinformatic tools and analysis methods that support research in transcriptional regulation. He has extensive experience analyzing gene expression microarray data from almost all technology platforms. In particular, he has pioneered improved methods of Affymetrix probe-level data analysis and has contributed to the widely used Bioconductor project. He has also contributed as a developer for the Cytoscape open source project. | ||
Biology and Statistics | Biology and Statistics | ||
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- | <p align="justify">Areas of expertise include gene regulation, microbial physiology, and molecular biology, with emphasis on medically and industrial important bacteria as Salmonella enterica, Escherichia coli and Lactococcus lactis. | + | <p align="justify">Areas of expertise include gene regulation, microbial physiology, and molecular biology, with emphasis on medically and industrial important bacteria as Salmonella enterica, Escherichia coli and Lactococcus lactis. Special expertise is found in the area of stress response and the genetics and physiology of nucleotide metabolism.</p> |
<p align="justify">Mogens Kilstrup received his master degree in 1986 in biochemistry from the University of Copenhagen and his PhD degree in Molecular biology in 1992, from the same place. After a Post doctoral position at DTU from 1993, he was appointed as associate professor in 2000 and advanced to Docent (full education related professor) in 2008.</p> | <p align="justify">Mogens Kilstrup received his master degree in 1986 in biochemistry from the University of Copenhagen and his PhD degree in Molecular biology in 1992, from the same place. After a Post doctoral position at DTU from 1993, he was appointed as associate professor in 2000 and advanced to Docent (full education related professor) in 2008.</p> |
Revision as of 11:16, 25 October 2010
Home | The Team | The Project | Parts submitted | Results | Notebook | Blog |
Extras: |
Greetings from Team DTU! The goal of our project is to enable colonies of E. coli bacteria to transition between production of two different reporter proteins. In our system, switching between states will be induced by exposing the bacteria to different inputs. Each of the states will have a specific input associated with it. There are multiple potential applications for biologicals "switches" such as these, this includes the improved control of production of additives in industrial biotechnological processes. For more details, please click here.
The team in Paris for the iGEM workshop (Malte is missing). |
Our Team of Students
Anastasiya S. Haugaard |
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Anja Sander |
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Annemi Ingebrekt Jollmann |
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Grzegorz 'Greg' Slodkowicz |
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Juliet Frederiksen |
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Lisa Blanc Iversen |
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Martin Malthe Borch |
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Maya Friis Kjaergaard |
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Patrick Fortuna |
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Thomas Trolle |
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Our Supervisors
Chris Workman |
Scientific BackgroundChristopher Workman is associate professor at the Center of Biological Sequence Analysis (CBS) at DTU. Dr. Workman has nine years of combined biotech industry and post-graduate experience. This includes three years of postdoctoral training in a leading Systems Biology lab at the University of California, San Diego headed by Dr. Trey Ideker. During this period he led a project that resulted in a map of transcriptional regulatory pathways that control the DNA damage response in yeast and a first author publication in Science. Dr. Workman has developed a number of bioinformatic tools and analysis methods that support research in transcriptional regulation. He has extensive experience analyzing gene expression microarray data from almost all technology platforms. In particular, he has pioneered improved methods of Affymetrix probe-level data analysis and has contributed to the widely used Bioconductor project. He has also contributed as a developer for the Cytoscape open source project. Biology and Statistics |
Mogens Kilstrup |
Scientific BackgroundAreas of expertise include gene regulation, microbial physiology, and molecular biology, with emphasis on medically and industrial important bacteria as Salmonella enterica, Escherichia coli and Lactococcus lactis. Special expertise is found in the area of stress response and the genetics and physiology of nucleotide metabolism. Mogens Kilstrup received his master degree in 1986 in biochemistry from the University of Copenhagen and his PhD degree in Molecular biology in 1992, from the same place. After a Post doctoral position at DTU from 1993, he was appointed as associate professor in 2000 and advanced to Docent (full education related professor) in 2008. |
Peter Ruhdal Jensen |
Scientific BackgroundAreas of research include Systems Biology, Molecular Biology, Genetics and Microbial Physiology. PRJ works with microbiological systems and applies control analysis and modeling to describe complex properties of biological systems. PRJ uses both bacteria and yeast as modelsystems, with focus on bacteria for industrial production processes. |
Sébastien Lemire |
Scientific BackgroundBiology |