Team:UNIPV-Pavia/Calendar/July/settimana2

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Latest revision as of 16:53, 24 October 2010

JULY: WEEK 2

July, 5th

LB agar plates prepared:

LB+Amp 100 (500ml)
LB+Cm 34 (500ml)
LB (250ml)
LB+Cm 12.5 (250ml)

^top

July, 6th

We decided to perform a TECAN test to evaluate the strength of some promoters belonging to the Anderson Promoters Collection. Inoculum from glycerol stocks (8ul in 5ml LB) for:

<partinfo>BBa_J23101</partinfo>
<partinfo>BBa_J23110</partinfo>
<partinfo>BBa_J23116</partinfo>
<partinfo>BBa_J23118</partinfo>
<partinfo>BBa_J23114</partinfo>
<partinfo>BBa_B0033</partinfo>

TECAN experiment started at 10:20am.

In the morning one single colony was picked for BW53474 E. coli strain and glycerol stock was prepared after about 7 hours (37°C 220rpm)

Inoculum of:

BW53474 (falcon containing culture for glycerol stock was re-filled with 5ml LB)
MG1655 (from glycerol stock)
BW25141 (from glycerol stock)
BW25142 (from glycerol stock)

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July, 7th

Competent cells preparation for:

MG1655
BW53474
BW25141
BW25142

PCR was performed to amplify Phasins:

All parts were correct!! :)

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July, 8th

Transformation of 1ul (~4ng) of miniprepped <partinfo>BBa_J23118</partinfo> into 100ul of home-made competent cells

MG1655
BW25141
BW25142
BW53474
DH5-alpha (as control)

to verify the transformation efficiency.

Transformed bacteria were plated on LB+Amp and left overnight in oven, 37°C.

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July, 9th

We checked the presence of colonies in plates. All plates showed red colonies!

MG1655 plate (with satellite colonies)	BW25141 plate	BW25142 plate
BW53474 plate	DH5-alpha plate

We calculated (thanks Nicolò) efficiency as #colonies/ug DNA

Strain	#colonies	Efficiency
MG1655	379	~10^5
BW25141	1431	~10^5
BW25142	2374	~10^5
BW53474	9984	~10^6 (very difficult to count correctly)
DH5alpha	7475 (only 100ul of cells plated)	~ 10^6 (very difficult to count correctly, previous tests showed an efficiency of ~10^8)

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@@ Line 34: / Line 34: @@
 <html><p align="center"><font size="4"><b>JULY: WEEK 2</b></font></p></html><hr><br>
+<html><a name="indice"/></html>
 ==July, 5th==
@@ Line 46: / Line 47: @@
 ==July, 6th==
-We decided to perform a <font size=4>[[Team:UNIPV-Pavia/Material Methods/Measurements/Tecan/test3|TECAN test]]</font> to evaluate the strength of some promoters belonging to the Anderson Promoters Collection. Inoculum from glycerol stpcks (8ul in 5ml LB) for:
+We decided to perform a TECAN test to evaluate the strength of some promoters belonging to the Anderson Promoters Collection. Inoculum from glycerol stocks (8ul in 5ml LB) for:
 *<partinfo>BBa_J23101</partinfo>
 *<partinfo>BBa_J23110</partinfo>
@@ Line 56: / Line 57: @@
 TECAN experiment started at 10:20am.
-In the morning one single colony was peaked for BW53474 E. coli strain and glycerol stock was prepared after about 7 hours (37°C 220rpm)
+In the morning one single colony was picked for BW53474 E. coli strain and glycerol stock was prepared after about 7 hours (37°C 220rpm)
 Inoculum of:
@@ Line 68: / Line 69: @@
 ==July, 7th==
-Competent cells preparationf for:
+Competent cells preparation for:
 *MG1655
 *BW53474
@@ Line 120: / Line 121: @@
 | DH5alpha ||  7475<br/>(only 100ul of cells plated)  || ~ 10^6<br/>(very difficult to count correctly,<br/>previous tests showed an efficiency of ~10^8)
 |}
+<div align="right"><small>[[#indice|^top]]</small></div>
 <!-- table previous next week -->
 <br><br>
@@ Line 137: / Line 141: @@
 </tr>
 </table>
-<div align="right"><small>[[#indice|^top]]</small></div>