BLASTN 2.2.24+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and
Webb Miller (2000), "A greedy algorithm for aligning DNA
sequences", J Comput Biol 2000; 7(1-2):203-14.


RID: A6C92PT5111


Query=   pSB1K3.nLMWP.SOD.hi1_premix -- 12..978 of sequence
Length=967


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

lcl|60031                                                          1461    0.0  

ALIGNMENTS
>lcl|60031 
Length=857

 Score = 1461 bits (791),  Expect = 0.0
 Identities = 807/814 (99%), Gaps = 3/814 (0%)
 Strand=Plus/Plus

Query  1    CTAT-AAAATAGGCGTATCACGAGGCAGAATTTCAGATaaaaaaaaTCCTTAGCTTTCGC  59
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  44   CTATAAAAATAGGCGTATCACGAGGCAGAATTTCAGATAAAAAAAATCCTTAGCTTTCGC  103

Query  60   TAAGGATGATTTCTGGAATTCGCGGCCGCTTCTAGATGGTTTCTCGTCGCCGCCGTCGTC  119
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  104  TAAGGATGATTTCTGGAATTCGCGGCCGCATCTAGATGGTTTCTCGTCGCCGCCGTCGTC  163

Query  120  GCGGTGGACGTCGCCGTCGCACCGGCGCGACGAAGGCCGTGGCCGTGCTGAAGGGCGACG  179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  164  GCGGTGGACGTCGCCGTCGCACCGGCGCGACGAAGGCCGTGGCCGTGCTGAAGGGCGACG  223

Query  180  GCCCAGTGCAGGGCATCATCAATTTCGAGCAGAAGGAAAGTAATGGACCAGTGAAGGTGT  239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  224  GCCCAGTGCAGGGCATCATCAATTTCGAGCAGAAGGAAAGTAATGGACCAGTGAAGGTGT  283

Query  240  GGGGAAGCATTAAAGGACTGACTGAAGGCCTGCATGGATTCCATGTTCATGAGTTTGGAG  299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  284  GGGGAAGCATTAAAGGACTGACTGAAGGCCTGCATGGATTCCATGTTCATGAGTTTGGAG  343

Query  300  ATAATACAGCAGGCTGTACCAGTGCAGGTCCTCACTTTAATCCTCTATCCAGAAAACACG  359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  344  ATAATACAGCAGGCTGTACCAGTGCAGGTCCTCACTTTAATCCTCTATCCAGAAAACACG  403

Query  360  GTGGGCCAAAGGATGAAGAGAGGCATGTTGGAGACTTGGGCAATGTGACTGCTGACAAAG  419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  404  GTGGGCCAAAGGATGAAGAGAGGCATGTTGGAGACTTGGGCAATGTGACTGCTGACAAAG  463

Query  420  ATGGTGTGGCCGATGTGTCTATTGAAGGTTCTGTGATCTCACTCTCAGGAGACCATGCCA  479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  464  ATGGTGTGGCCGATGTGTCTATTGAAGGTTCTGTGATCTCACTCTCAGGAGACCATGCCA  523

Query  480  TCATTGGCCGCACACTGGTGGTCCATGAAAAAGCAGATGACTTGGGCAAAGGTGGAAATG  539
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  524  TCATTGGCCGCACACTGGTGGTCCATGAAAAAGCAGATGACTTGGGCAAAGGTGGAAATG  583

Query  540  AAGAAAGTACAAAGACAGGAAACGCTGGAAGTCGTTTGGCTTGTGGTGTAATTGGGATCG  599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  584  AAGAAAGTACAAAGACAGGAAACGCTGGAAGTCGTTTGGCTTGTGGTGTAATTGGGATCG  643

Query  600  CCCAAACCGGCCATCACCATCATCACCACACCGGTTAATACTAGTAGCGGCCGCTGCAGT  659
            |||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||
Sbjct  644  CCCAAACCGGCCATCATCATCATCATCATACCGGTTAATACTAGTAGCGGCCGCTGCAGT  703

Query  660  CCGGCAAAAAA--GGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGAT  717
            |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  704  CCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGAT  763

Query  718  TACTTCGCGTTATGCAGGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGC  777
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  764  TACTTCGCGTTATGCAGGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGC  823

Query  778  GGCGAGCGGTATCAGCTCACTCAAAGGCGGTAAT  811
            ||||||||||||||||||||||||||||||||||
Sbjct  824  GGCGAGCGGTATCAGCTCACTCAAAGGCGGTAAT  857