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Team:TU Delft/16 July 2010 content
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==Ordered DNA + Solvent Tolerance and Hydrocarbon Sensing== | ==Ordered DNA + Solvent Tolerance and Hydrocarbon Sensing== | ||
| - | The colony PCR of [https://2010.igem.org/Team:TU_Delft#/blog | + | The colony PCR of [https://2010.igem.org/Team:TU_Delft#page=pages/blog&blog=15_July_2010 yesterday] was put on[[Team:TU_Delft/protocols/agarose_gel|1% agarose gel]] |
We harvested the 1 mL bacterial cells of possible correct transformations. The pellets were stored at -20 °C. | We harvested the 1 mL bacterial cells of possible correct transformations. The pellets were stored at -20 °C. | ||
Revision as of 12:43, 3 August 2010
Contents |
Lab work
Ordered DNA + Solvent Tolerance and Hydrocarbon Sensing
The colony PCR of yesterday was put on1% agarose gel
We harvested the 1 mL bacterial cells of possible correct transformations. The pellets were stored at -20 °C. We used 3 mL of the bacterial cells to make -80 °C stocks.
Characterization of Anderson RBS sequences
Fluorescence measurements Attempt #2
Data analysis to follow shortly (good stuff!)
Assembly of reference construct & positive control
Yesterday's digestion products of K081005 and I13401 were set for ligation over the weekend at 4 °C:
| # | BioBrick | Fragment | Recipient plasmid | Final volume |
| 1 | K136011 | 17.5 μL ‘E-K081005-S’ | 4 μL ‘E-pSB1A2 I13401-X’ | 25 μL |
| 2 | K136011 | 17.5 μL ‘E-K081005-S’ | 4 μL ‘E-pSB1A2 I13401-X | 25 μL |
| 3 | Ligation control | None | 4 μL ‘E-pSB1A2 I13401-X | 25 μL |
To all samples with an end volume of 25 μL, 2.5 μL Ligase buffer was added.
The Birnboim method was used to isolate J23100 and I13522 (both in pSB1A2) from the o/n 5 mL LB cultures. We used 3 mL of the bacterial cells to make -80 °C stocks . The following concentrations of plasmid were obtained:
| BioBrick | Concentration (ng/μL) |
| J23100 | 130.7 |
| I13522 | 106.7 |
