"
Team:Stockholm/8 July 2010
From 2010.igem.org
(Difference between revisions)
m |
|||
| Line 4: | Line 4: | ||
== Hassan == | == Hassan == | ||
| - | Databases we should choose better not to be predicted databases, such as String, or we can use these type of databases with more care, on the other hand databases which include experimentally proven PPI from small scale or large scale studies seem to be more useful for now. There is also another type of databases that are of interest, are Meta-databases, these are as joint point for different primary databases and integrating them. [http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1000807] | + | *Databases we should choose better not to be predicted databases, such as String, or we can use these type of databases with more care, on the other hand databases which include experimentally proven PPI from small scale or large scale studies seem to be more useful for now. There is also another type of databases that are of interest, are Meta-databases, these are as joint point for different primary databases and integrating them. [http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1000807] |
| + | |||
| + | *A first obstacle to evaluate the reliability of PPIs is the low coverage of the databases for each specific interactome. One way to increase coverage is to integrate data reported by different primary databases.[http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1000807] | ||
Revision as of 13:56, 8 July 2010
| Home | Project Idea | Lab Work | Results | Modelling | Team | Follow us on  and 
| 2010.igem.org 
|
Hassan
- Databases we should choose better not to be predicted databases, such as String, or we can use these type of databases with more care, on the other hand databases which include experimentally proven PPI from small scale or large scale studies seem to be more useful for now. There is also another type of databases that are of interest, are Meta-databases, these are as joint point for different primary databases and integrating them. [1]
- A first obstacle to evaluate the reliability of PPIs is the low coverage of the databases for each specific interactome. One way to increase coverage is to integrate data reported by different primary databases.[2]
