Team:Nevada/Original Data

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Data collected from microarray experiments performed by Jian-Kang Zhu, ''et al,'' and published on the Gene Expression Omnibus database (Zhu, ''et al'').  
Data collected from microarray experiments performed by Jian-Kang Zhu, ''et al,'' and published on the Gene Expression Omnibus database (Zhu, ''et al'').  
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Table
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{| border="3"
 +
|Raw Data
 +
|ICE1
 +
|DREB1A
 +
|DREB1B
 +
|DREB1C
 +
|RD29A
 +
|ZAT6
 +
|RAP2.1
 +
|RAP2.6
 +
|-
 +
|t0
 +
|1358.1
 +
|96.6
 +
|24.5
 +
|69.4
 +
|1509.2
 +
|145.3
 +
|100.4
 +
|58.5
 +
|-
 +
|t1
 +
|1487.7
 +
|6041
 +
|4826.5
 +
|11809.1
 +
|3284.5
 +
|676.3
 +
|103.4
 +
|57.3
 +
|-
 +
|t2
 +
|1547.9
 +
|6181.2
 +
|4099
 +
|11249.3
 +
|10644.4
 +
|1620.6
 +
|357.8
 +
|52.3
 +
|-
 +
|t3
 +
|1476.5
 +
|1452.8
 +
|815.4
 +
|4510.4
 +
|18745.9
 +
|2850.7
 +
|1599.3
 +
|125
== Log Base 2 of Normalized Ratios ==
== Log Base 2 of Normalized Ratios ==

Revision as of 20:51, 26 October 2010

Binary Bender.png

 


Contents

Original Data Set

Data collected from microarray experiments performed by Jian-Kang Zhu, et al, and published on the Gene Expression Omnibus database (Zhu, et al).

Raw Data ICE1 DREB1A DREB1B DREB1C RD29A ZAT6 RAP2.1 RAP2.6
t0 1358.1 96.6 24.5 69.4 1509.2 145.3 100.4 58.5
t1 1487.7 6041 4826.5 11809.1 3284.5 676.3 103.4 57.3
t2 1547.9 6181.2 4099 11249.3 10644.4 1620.6 357.8 52.3
t3 1476.5 1452.8 815.4 4510.4 18745.9 2850.7 1599.3 125

Log Base 2 of Normalized Ratios

Table

Boolean Values (Threshold of 2.0)

Table

Boolean Input Functions

The number of Boolean inputs for this data amounted to 20 megabytes worth of text files, and thus, has been omitted. The extremely large number of inputs going into each gene indicated that the process needed some refinement to limit the number of possible interactions between these genes. This lead to the data interpolation and limiting the Boolean inputs to being no greater than 4 for each gene.

For some examples of Boolean Input Functions, please see the interpolated data page.

References

Zhu, J-K., Lee, B., Henderson, D. (2005) The Arabidopsis Cold-Responsive Transcriptome and Its Regulation by ICE1. Plant Cell. Vol. 17, Issue 11, p3155-3175.
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