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Team:NYU/Programming
From 2010.igem.org
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=====Overlap Oligo Maker===== | =====Overlap Oligo Maker===== | ||
| - | * Some very fast and efficient DNA assembly methods require | + | * Some very fast and efficient DNA assembly methods require parts to overlap in their sequences. This script will take two DNA sequences and output the oligos (and their Tms) one would need to PCR constructs with overlapping ends. |
*I'm a CGI machine! [http://www.russelldurrett.com/overlapoligos.html Check out the new and improved interactive overlap oligo maker.] | *I'm a CGI machine! [http://www.russelldurrett.com/overlapoligos.html Check out the new and improved interactive overlap oligo maker.] | ||
[http://openwetware.org/images/6/67/Overlapoligos.txt Overlap Oligos Source] | [http://openwetware.org/images/6/67/Overlapoligos.txt Overlap Oligos Source] | ||
Revision as of 02:01, 11 October 2010
Biobricking Primers
- This script allows the user to input a DNA sequence and outputs the primers necessary for biobricking that sequence via PCR. The script calculates Tm but does not (yet) consider primer dimers.
- Finally got the CGI working - go here for an online version!
Overlap Oligo Maker
- Some very fast and efficient DNA assembly methods require parts to overlap in their sequences. This script will take two DNA sequences and output the oligos (and their Tms) one would need to PCR constructs with overlapping ends.
- I'm a CGI machine! Check out the new and improved interactive overlap oligo maker.
