Team:MIT phage construction

From 2010.igem.org

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<ul>
<ul>
                         <li><a href="https://2010.igem.org/Team:MIT_toggle">Overview</a></li>
                         <li><a href="https://2010.igem.org/Team:MIT_toggle">Overview</a></li>
 +
                        <li><a href="https://2010.igem.org/Team:MIT_tmodel">Modelling</a></li>
<li><a href="https://2010.igem.org/Team:MIT_tconst">Toggle Construction</a></li>
<li><a href="https://2010.igem.org/Team:MIT_tconst">Toggle Construction</a></li>
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<li><a href="#">Characterization</a></li>
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<li><a href="https://2010.igem.org/Team:MIT_tchara">Characterization</a></li>
</ul>
</ul>
</dd>
</dd>
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</dl>
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<dl id ="specialnav">
<dt><b>Phage</b></dt>
<dt><b>Phage</b></dt>
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</ul>
</ul>
</dd>
</dd>
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</dl>
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<dl id ="nav">
<dt><b>Mammalian</b></dt>
<dt><b>Mammalian</b></dt>
<dd>
<dd>
<ul>
<ul>
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                         <li><a href="#">Overview</a></li>
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                         <li><a href="https://2010.igem.org/Team:MIT_mammalian">Overview</a></li>
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<li><a href="#">Standard and Design</a></li>
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<li><a href="https://2010.igem.org/Team:MIT_mammalian_Standard">New Mammalian Standard </a></li>
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<li><a href="#">Experiments</a></li>
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                        <li><a href="https://2010.igem.org/Team:MIT_mammalian_Circuit">Circuit Design</a></li>
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<li><a href="https://2010.igem.org/Team:MIT_mammalian_Mechanosensation"> Mechanosensation</a></li>
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<li><a href="https://2010.igem.org/Team:MIT_mammalian_Bone"> Bone Formation</a></li>
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<li><a href="https://2010.igem.org/Team:MIT_mammalian_Switch"> Synthetic Switch</a></li>
</ul>
</ul>
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<br>
<br>
<br><b><a href="http://partsregistry.org/Part:BBa_K415100">BBa_K415100</a></b>
<br><b><a href="http://partsregistry.org/Part:BBa_K415100">BBa_K415100</a></b>
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<br>Components: RBS : M13 PVIII
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<ul><li>
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Components: RBS : M13 PVIII</li>
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<li>
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Explanation: This is a basic translational unit: a ribosome-binding site and the p8 gene.  You can attach any promoter in front of it for expression.</li></ul>
<br><img src="http://partsregistry.org/wiki/images/7/7c/K415100.png">
<br><img src="http://partsregistry.org/wiki/images/7/7c/K415100.png">
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<br><b><a href="http://partsregistry.org/Part:BBa_K415108">BBa_K415108</a></b>
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<br>Components: RBS : M13 PIII
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<br><img src="http://partsregistry.org/wiki/images/7/7c/K415100.png">
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<br><br><b><a href="http://partsregistry.org/Part:BBa_K415108">BBa_K415108</a></b>
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<br><b><a href="http://partsregistry.org/Part:BBa_K415138">BBa_K415138</a></b>
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<ul><li>
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<br>Components: pLac : RBS : M13 PIII
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Components: RBS : M13 PIII</li>
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<br><img src="">
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<li>
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<br><br><b>BBa_K415147</b>
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Explanation: This is a basic translational unit: a ribosome-binding site and the p3 gene.  You can attach any promoter in front of it for expression.</li></ul>
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<br>Components: RBS : M13 PVIII-Fos
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<br><img src="http://partsregistry.org/wiki/images/7/7c/K415100.png">
<br><img src="http://partsregistry.org/wiki/images/7/7c/K415100.png">
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<br><br><b>BBa_K415148</b>
 
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<br>Components: RBS : M13 PVIII-Jun
 
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<br><img src="http://partsregistry.org/wiki/images/7/7c/K415100.png">
 
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<br><br><b>BBa_K415149</b>
 
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<br>Components: RBS : M13 PVIII-ACID
 
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<br><img src="http://partsregistry.org/wiki/images/7/7c/K415100.png">
 
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<br><br><b>BBa_K415150</b>
 
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<br>Components: RBS : M13 PVIII-BASE
 
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<br><img src="http://partsregistry.org/wiki/images/7/7c/K415100.png">
 
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<br><br><b>BBa_K415151</b>
 
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<br>Components: RBS : M13 PVIII-GR1
 
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<br><img src="http://partsregistry.org/wiki/images/7/7c/K415100.png">
 
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<br><br><b>BBa_K415152</b>
 
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<br>Components: RBS : M13 PVIII-GR2
 
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<br><img src="http://partsregistry.org/wiki/images/7/7c/K415100.png">
 
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</td>
 
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</table>
 
 +
<br><br><b><a href="http://partsregistry.org/Part:BBa_K415138">BBa_K415138</a></b>
 +
<ul><li>
 +
Components: pLac : RBS : M13 PIII</li>
 +
<li>
 +
Explanation: This is a basic expression unit: a promoter in front of a ribosome-binding site and the p3 gene.  We used this to generate constitutive expression of p3 in cells infected with hyperphage in an attempt to rescue the wild-type, non-hairy phenotype.  See the results page for an AFM image of this working.</li></ul>
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<br><img src="https://static.igem.org/mediawiki/2010/4/4a/138.png">
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<br><br><b><a href="http://partsregistry.org/Part:BBa_K415147">BBa_K415147 - K415152</a></b>
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<ul><li>
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Components: PluxR/cI : RBS : mCherry : Term : PtetR : RBS : LuxR:Term : Plux/cI : RBS : M13 PVIII-Zipper</li>
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<li>Explanation: These parts are K415010 + RBS + P8-fusion protein.  As is, this part produces mCherry and the p8-fusion gene in the presence of c6-AHL (and there's also non-trivial leaky expression).  When combined with the Hyperphage plasmid, the p8-fusion protein should become incorporated into the phage coat along with normal p8; zippers should then be exposed on the polyphage hairs outside of the cell, allowing for potential cross-linking among cells.  With the Collins toggle, UV exposure can be used to control the expression of the p8-fusion protein.  Note: below is K415147 only; the rest are similar but with a different translational unit on the end for each linker (Fos, Jun, ACID, BASE, GR1, GR2).
 +
</li></ul>
 +
<br><img src="http://partsregistry.org/wiki/images/a/a3/147.png">
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 +
<div style="text-align:center">
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&larr; <a href="https://2010.igem.org/Team:MIT_phage_design">Design</a>
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&nbsp;
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&nbsp;
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&nbsp;
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<a href="https://2010.igem.org/Team:MIT_phage_results">Results</a> &rarr;
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</div>
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 +
</td>
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</table>
</div>
</div>
</div>
</div>
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Latest revision as of 22:50, 27 October 2010

Phage
hairy cells and polymerizing phage - construction

PARTS

BBa_K415100
  • Components: RBS : M13 PVIII
  • Explanation: This is a basic translational unit: a ribosome-binding site and the p8 gene. You can attach any promoter in front of it for expression.



BBa_K415108
  • Components: RBS : M13 PIII
  • Explanation: This is a basic translational unit: a ribosome-binding site and the p3 gene. You can attach any promoter in front of it for expression.



BBa_K415138
  • Components: pLac : RBS : M13 PIII
  • Explanation: This is a basic expression unit: a promoter in front of a ribosome-binding site and the p3 gene. We used this to generate constitutive expression of p3 in cells infected with hyperphage in an attempt to rescue the wild-type, non-hairy phenotype. See the results page for an AFM image of this working.



BBa_K415147 - K415152
  • Components: PluxR/cI : RBS : mCherry : Term : PtetR : RBS : LuxR:Term : Plux/cI : RBS : M13 PVIII-Zipper
  • Explanation: These parts are K415010 + RBS + P8-fusion protein. As is, this part produces mCherry and the p8-fusion gene in the presence of c6-AHL (and there's also non-trivial leaky expression). When combined with the Hyperphage plasmid, the p8-fusion protein should become incorporated into the phage coat along with normal p8; zippers should then be exposed on the polyphage hairs outside of the cell, allowing for potential cross-linking among cells. With the Collins toggle, UV exposure can be used to control the expression of the p8-fusion protein. Note: below is K415147 only; the rest are similar but with a different translational unit on the end for each linker (Fos, Jun, ACID, BASE, GR1, GR2).

Design       Results