Team:LMU-Munich/ProSearch/Schedule

From 2010.igem.org

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=Environmental Conditions=
=Environmental Conditions=
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The '''[http://www.ncbi.nlm.nih.gov/sites/entrez?db=ncbisearch NCBI GEO]''' and '''[http://www.ebi.ac.uk/arrayexpress/browse.html ArrayExpress]''' databases were extensively searched for environmental conditions leading to apoptosis in 293T cells and genes differentially expressed under these conditions. The following data was obtained:  
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The [http://www.ncbi.nlm.nih.gov/sites/entrez?db=ncbisearch NCBI GEO] and [http://www.ebi.ac.uk/arrayexpress/browse.html ArrayExpress] databases were extensively searched for environmental conditions leading to apoptosis in 293T cells and genes differentially expressed under these conditions. The following data was obtained:  
{| class="wikitable" border="0" style="width: 600px;"
{| class="wikitable" border="0" style="width: 600px;"
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|-
|-
| Conduritol B Epoxide treatment
| Conduritol B Epoxide treatment
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| align="center|"57
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| align="center"|57
| row 1, cell 3
| row 1, cell 3
|-
|-
| Gammaherpesvirus
| Gammaherpesvirus
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| align="center|103
+
| align="center"|103
| row 1, cell 3
| row 1, cell 3
|-
|-
| HIV integration
| HIV integration
-
| align="center|1
+
| align="center"|1
| row 1, cell 3
| row 1, cell 3
|-
|-
| HLTV-1 p30
| HLTV-1 p30
-
| align="center|2291
+
| align="center"|2291
| row 1, cell 3
| row 1, cell 3
|-
|-
| Hypoxia
| Hypoxia
-
| align="center|2
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| align="center"|2
| row 1, cell 3
| row 1, cell 3
|-
|-
| RCAS-beta-cateinS37A
| RCAS-beta-cateinS37A
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| align="center|55
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| align="center"|55
| row 1, cell 3
| row 1, cell 3
|}
|}

Revision as of 10:18, 26 September 2010


Cell Line

The cell line used in this project is the human embryonic kidney cell line 293T .

Environmental Conditions

The NCBI GEO and ArrayExpress databases were extensively searched for environmental conditions leading to apoptosis in 293T cells and genes differentially expressed under these conditions. The following data was obtained:

Environmental Condition (EV) #genes selectively expressed in this EV Reference
Conduritol B Epoxide treatment 57 row 1, cell 3
Gammaherpesvirus 103 row 1, cell 3
HIV integration 1 row 1, cell 3
HLTV-1 p30 2291 row 1, cell 3
Hypoxia 2 row 1, cell 3
RCAS-beta-cateinS37A 55 row 1, cell 3


 

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