Team:LMU-Munich/ProSearch

From 2010.igem.org

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[[Image:prosearchZelle.jpg|300px|Logo|right]]
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=ProSearch System =
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==ProSearch System==
This system is to search for new enhancer-promoter combinations that efficiently trigger gene expression in response to different stimuli. This part of the project is carried out through a bioinformatic modeling process. The end-product is a databank of related genes, their promoters and transcription factors at the input of a wished environmental condition. This system is useful for the construction of new inducible systems trying to utilize apoptosis or other gene expression in the human cell-line 293T.
This system is to search for new enhancer-promoter combinations that efficiently trigger gene expression in response to different stimuli. This part of the project is carried out through a bioinformatic modeling process. The end-product is a databank of related genes, their promoters and transcription factors at the input of a wished environmental condition. This system is useful for the construction of new inducible systems trying to utilize apoptosis or other gene expression in the human cell-line 293T.
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=Retrieve Genes and their Transcription Factors for a specific condition=
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==Retrieve Genes, their Promoters and Transcription Factors for a specific condition==
<html>
<html>
<body>
<body>
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<form action="/cgi-bin/getTF.cgi" method="get">
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<form action="http://ka0.org/igem/getTF.cgi" method="get">  
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<p>Condition<br>
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<p>Condition<br>  
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<SELECT NAME="condition">
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<SELECT NAME="condition">  
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<OPTION VALUE="RCAS-beta-cateinS37A">RCAS-beta-cateinS37A</OPTION>
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<OPTION VALUE="beta-catenin">bCatenin treatment</OPTION>  
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<OPTION VALUE="Conduritol B Epoxide">Conduritol B Epoxide</OPTION>  
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<OPTION VALUE="conduritolB">conduritol B treatment</OPTION>  
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<OPTION VALUE="Gammaherpesvirus">Gammaherpesvirus</OPTION>  
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<OPTION VALUE="gHerpes">gHerpes infection</OPTION>  
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<OPTION VALUE="HIV Integration">HIV Integration</OPTION>
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<OPTION VALUE="hiv">HIV infection</OPTION>  
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<OPTION VALUE="HLTV-1 p30">HLTV-1 p30</OPTION>  
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<OPTION VALUE="hypoxia">hypoxia</OPTION>  
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<OPTION VALUE="Hypoxia">Hypoxia</OPTION>
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<OPTION VALUE="htlv">HTLV infection</OPTION>  
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</SELECT>
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</SELECT>  
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<p>Specific Gene (leave empty for all):<br><input type="text" name="gene" size="50" maxlength="50"></p>
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<p>Specific Gene (leave empty for all):<br><input type="text" name="gene" size="50" maxlength="50"></p>  
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<p><input type="submit" value="Send Query"></p>
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<p><input type="submit" value="Send Query"></p>  
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</form>
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</form>  
</body>
</body>
</html>
</html>
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Latest revision as of 14:43, 25 October 2010


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ProSearch System

This system is to search for new enhancer-promoter combinations that efficiently trigger gene expression in response to different stimuli. This part of the project is carried out through a bioinformatic modeling process. The end-product is a databank of related genes, their promoters and transcription factors at the input of a wished environmental condition. This system is useful for the construction of new inducible systems trying to utilize apoptosis or other gene expression in the human cell-line 293T.

Retrieve Genes, their Promoters and Transcription Factors for a specific condition

Condition

Specific Gene (leave empty for all):