Team:LMU-Munich/Jump-or-die/Schedule

From 2010.igem.org

(Difference between revisions)
(Aim 3: Assembling Biobricks)
(Aim 2: Inserting PCR Products in pSB1C3 and verifying Sequenz)
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<b>Note: for attB two Primers ([[Team:LMU-Munich/Cut'N'survive/Schedule/Primer18| 18attBF]][[Team:LMU-Munich/Cut'N'survive/Schedule/Primer19| 19attBR]]) used.</b>
<b>Note: for attB two Primers ([[Team:LMU-Munich/Cut'N'survive/Schedule/Primer18| 18attBF]][[Team:LMU-Munich/Cut'N'survive/Schedule/Primer19| 19attBR]]) used.</b>
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==Aim 2: Inserting PCR Products in pSB1C3 and verifying Sequenz ==
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==Aim 2: Inserting PCR Products in pSB1C3 and verifying Sequence ==
PCR1: Insertion [ ] -> [[Team:LMU-Munich/Jump-or-die/Schedule/SequenzPCR1| Sequence of PCR1 from sequencing]]: confirmed [ ]
PCR1: Insertion [ ] -> [[Team:LMU-Munich/Jump-or-die/Schedule/SequenzPCR1| Sequence of PCR1 from sequencing]]: confirmed [ ]
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PCR6: Insertion [ ] -> [[Team:LMU-Munich/Jump-or-die/Schedule/SequenzPCR6| Sequence of PCR6 from sequencing]]: confirmed [ ]
PCR6: Insertion [ ] -> [[Team:LMU-Munich/Jump-or-die/Schedule/SequenzPCR6| Sequence of PCR6 from sequencing]]: confirmed [ ]
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PCR9: Insertion [ ] -> [[Team:LMU-Munich/Jump-or-die/Schedule/SequenzPCR9| Sequenceof PCR9 from sequencing]]: confirmed [ ]
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PCR9: Insertion [ ] -> [[Team:LMU-Munich/Jump-or-die/Schedule/SequenzPCR9| Sequence of PCR9 from sequencing]]: confirmed [ ]
PCR10: Insertion [ ] -> [[Team:LMU-Munich/Jump-or-die/Schedule/SequenzPCR10| Sequence of PCR10 from sequencing]]: confirmed [ ]
PCR10: Insertion [ ] -> [[Team:LMU-Munich/Jump-or-die/Schedule/SequenzPCR10| Sequence of PCR10 from sequencing]]: confirmed [ ]

Revision as of 17:29, 24 October 2010


Contents

Aim 1: DNA reproduction+PCR

For PCR key see PCR key

Colourcode for the primers: Annealing part, mutagenised part, other sequences integrated into primer


PCR1: replication of the Tet-inducible CMV promotor [X] PCR1.jpg

Primer used: 1TreF 2TreR expected product size: 492 bp


PCR4a: replication human bak with mutagenesis (Pst1) [ ] PCR4a.jpg

Primer used: 7BakF 8BakMutPR expected product size: 330 bp


PCR4b: replication human bak with mutagenesis (Pst1) [ ] PCR4b.jpg

Primer used: 9BakMutPF 10BakR expected product size: 376 bp


PCR5: joining PCR of human bak [ ] PCR5.jpg

Primer used: 7BakF 10BakR expected product size: 688 bp


PCR6: replication of the SV40-polyadenylation site [X] PCR6.jpg

Primer used: 11PAF 12PAR expected product size: 237 bp


PCR9: replication of eGFP with attP in primer [ ] PCR9.jpg

Primer used: 20eGFPattPF 21eGFPR expected product size: 808 bp


PCR10: Replikation of PhiC31o [X] PCR10.jpg

Primer used: 22PC31oF 23PC31oR expected product size: 1888 bp

Note: for attB two Primers ( 18attBF 19attBR) used.

Aim 2: Inserting PCR Products in pSB1C3 and verifying Sequence

PCR1: Insertion [ ] -> Sequence of PCR1 from sequencing: confirmed [ ]

PCR5: Insertion [ ] -> Sequence of PCR5 from sequencing: confirmed [ ]

PCR6: Insertion [ ] -> Sequence of PCR6 from sequencing: confirmed [ ]

PCR9: Insertion [ ] -> Sequence of PCR9 from sequencing: confirmed [ ]

PCR10: Insertion [ ] -> Sequence of PCR10 from sequencing: confirmed [ ]

Aim 3: Assembling Biobricks

We are using the 3A System to assemble Biobricks.

Assembly of BioBricks:


Assembling Construct 1

J1S.jpg

Assembling Construct 2

J2S.jpg

Assembling Construct 3

J3S.jpg

Aim 4: Testing products

Construct 1

Jump construct 1

- Transform into HeLa cells to see if they survive.

-> Check the leakiness of tet-on-promoter

- Induce tet-on-promoter to see, if cells die.

-> Check if construct 1 is working

Construct 2

Jump construct 2

- Sequencing

Construct 3

Jump construct 3

- Transform into HeLa cells

- Western Blot or Proteinchromatography

-> Check if PhiC31o is read off

Aim 5: Testing system