Team:KAIST-Korea/Notebook/Memo/Data

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Revision as of 10:47, 16 July 2010

Data

pDRAW32
pDRAW32 is a program which draws plasmid or linear gene, and it scans restriction enzyme site of its own DB.
You can see RFLP pattern.
You can download it at http://www.acaclone.com/

Protein information for virus-inspired Drug delivery system.

HNMT Entrez ID : 3176

  related mRNA or protein sequence

NM_001024074.2 → NP_001019245.1

   histamine N-methyltransferase isoform 2

NM_001024075.1 → NP_001019246.1

   histamine N-methyltransferase isoform 3

NM_006895.2 → NP_008826.1

   histamine N-methyltransferase isoform 1

(3 kinds of isoform is obtained by alternative splicing)

Human Coronaviral Spike protein.

   NL63 strain

Nucleotide sequence is in

http://www.ncbi.nlm.nih.gov/nuccore/49169782/?from=20472&to=24542&report=fasta (Gene ID : 2943499)

protein sequence is in

http://www.ncbi.nlm.nih.gov/protein/45655909?report=genpept

   SARS starin

nucleotide sequence is in

http://www.ncbi.nlm.nih.gov/nuccore/30271926/?from=21492&to=25259&report=fasta (Gene ID : 1489668)

protein sequence is in

http://www.ncbi.nlm.nih.gov/protein/29836496?report=genpept

@@ Line 25: / Line 25: @@
 You can download it at http://www.acaclone.com/
 <br><br>
-<span style=font-size:15px> <b> Idea 2 </b> </span>
+<span style=font-size:15px> <b> Protein information for virus-inspired Drug delivery system. </b> </span>
 <br>
-Using bacteria we could make a carrier that have chemicals that can cure cancer with targeting.
+HNMT
+Entrez ID : 3176
+   related mRNA or protein sequence
+NM_001024074.2 → NP_001019245.1
+    histamine N-methyltransferase isoform 2
+NM_001024075.1 → NP_001019246.1
+    histamine N-methyltransferase isoform 3
+NM_006895.2 → NP_008826.1
+    histamine N-methyltransferase isoform 1
+(3 kinds of isoform is obtained by alternative splicing)
+Human Coronaviral Spike protein.
+    NL63 strain
+: Nucleotide sequence is in
+ http://www.ncbi.nlm.nih.gov/nuccore/49169782/?from=20472&to=24542&report=fasta (Gene ID : 2943499)
+: protein sequence is in
+http://www.ncbi.nlm.nih.gov/protein/45655909?report=genpept
+    SARS starin
+: nucleotide sequence is in
+http://www.ncbi.nlm.nih.gov/nuccore/30271926/?from=21492&to=25259&report=fasta (Gene ID : 1489668)
+: protein sequence is in
+http://www.ncbi.nlm.nih.gov/protein/29836496?report=genpept
 <br><br>
-<span style=font-size:15px> <b> Idea 3 </b> </span>
-<br>
-Using magnetosome we could make a system that can detect magnetic field like other iGEM team detected toxicity.
-problem
-This bacteria is reacting passively to the magnetic field. Therefore it is not appropriate for detection.
-<br><br>
-<span style=font-size:15px> <b> Idea 4 </b> </span>
-<br>
-Want to make a oscillator. There are memory network that remembers. And with that we can combine this with telomere. We can later use this protocol.
-<br><br>
-<span style=font-size:15px> <b> Idea 5 </b> </span>
-<br>
-Using vibration maybe we can make bacteria make sound.
-<br><br>
-<span style=font-size:15px> <b> Idea 6 </b> </span>
-<br>
-If we can make a NAND gate, we can make a calculator. Maybe we can make a compare system. And maybe we can use this for comparing concentration difference. And in case of NAND gate maybe we can in one cell system. If we make this in one cell then we can apply on other similar systems.
-<br><br>
-<span style=font-size:15px> <b> Idea 7 </b> </span>
-<br>
-We can put antigen in mosquitoes saliva And naturally we put antigens in people to get tolerance to malaria. Since malaria mosquitoes are active at night we can use mosquitoes that are active at day.
-problem
-It could make a problem if accidently inject too much antigens.
-<br><br>
-<span style=font-size:15px> <b> Idea 8 </b> </span>
-<br>
-In case of DDS packing is the problem. And we can use vesicle system for packing.
-<br><br>
-<span style=font-size:15px> <b> Idea 9 </b> </span>
-<br>
-Using Na+ pump maybe we can make electricity. Even there is a similar study that is exists. There are microorganism battery which circulate electron. If we use this system in bacteria we might make battery.
-<br><br>
-<span style=font-size:15px> <b> Idea 10 </b> </span>
-<br>
-RBC can trap virus because virus can't replicate in RBC. But this system need to use fake cell only to delay. And only has probability to trap. Therefore it is not perfect system. Maybe Since it is making delay, we can use it at rabies because its infection timing is faster than recovering timing.
-<br><br>
-<span style=font-size:15px> <b> Idea 11 </b> </span>
-<br>
-There are many steps in mammalian cell replication if we make a mammalian cell replicatable in vitro, it would be very convenient in laboratory life.
-<br><br><br>
-<span style=font-size:17px> <b> Idea Sum-up </b> </span>
-<br>
-Maybe we can work on mammalian cell replication tool or DDS that works on respiratory system. So we decided to look for that information.