Team:IvyTech-South Bend/Parts

From 2010.igem.org

(Difference between revisions)
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The T9002 AHL detector was ligated to a LacZ reporter gene by the conventional biobrick assembly #10.
The T9002 AHL detector was ligated to a LacZ reporter gene by the conventional biobrick assembly #10.
-
Sequence and Features
 
-
Format: Subparts|Ruler|SS|DSSearch: Length: 3154 bpContext: Part onlyGet selected sequence
 
-
. .1 11 21 31 41 51 61 71 81 91
 
-
1 500 1K 1.5K 2K 2.5K 3K 3.5K 4K
 
-
T9002
 
-
I732094
 
-
E0044
 
-
C0062
 
-
E0040
 
-
I732006
 
-
B0010
 
-
B0010
 
-
B0010
 
-
R0062
 
-
R0040
 
-
B0012
 
-
B0012
 
-
B0012
 
-
I732007
 
-
B0032
 
-
B0034
 
-
B0034
 
-
B0034
 
-
prefix
 
-
luxR
 
-
lacZ
 
-
STOP
 
-
Stop
 
-
Stop
 
-
Stop
 
-
-35
 
-
-10
 
-
-35
 
-
-10
 
-
RBS-3Weak
 
-
RBS
 
-
LuxR/HSL
 
-
TetR 1
 
-
TetR 2
 
-
T7 TE
 
-
T7 TE
 
-
T7 TE
 
-
BglII
 
-
BamHI
 
-
PolyA
 
-
PolyA
 
-
PolyA
 
-
T
 
-
A
 
-
START
 
-
tccctatcag tgatagagat tgacatccct atcagtgata gagatactga gcactactag agaaagagga gaaatactag atgaaaaaca taaatgccga
 
-
1
 
-
agggatagtc actatctcta actgtaggga tagtcactat ctctatgact cgtgatgatc tctttctcct ctttatgatc tactttttgt atttacggct
 
-
T9002
 
-
C0062
 
-
R0040
 
-
B0034
 
-
prefix
 
-
luxR
 
-
-35
 
-
-10
 
-
TetR 1
 
-
TetR 2
 
-
cgacacatac agaataatta ataaaattaa agcttgtaga agcaataatg atattaatca atgcttatct gatatgacta aaatggtaca ttgtgaatat
 
-
101
 
-
gctgtgtatg tcttattaat tattttaatt tcgaacatct tcgttattac tataattagt tacgaataga ctatactgat tttaccatgt aacacttata
 
-
T9002
 
-
C0062
 
-
luxR
 
-
tatttactcg cgatcattta tcctcattct atggttaaat ctgatatttc aatcctagat aattacccta aaaaatggag gcaatattat gatgacgcta
 
-
201
 
-
ataaatgagc gctagtaaat aggagtaaga taccaattta gactataaag ttaggatcta ttaatgggat tttttacctc cgttataata ctactgcgat
 
-
T9002
 
-
C0062
 
-
luxR
 
-
T
 
-
atttaataaa atatgatcct atagtagatt attctaactc caatcattca ccaattaatt ggaatatatt tgaaaacaat gctgtaaata aaaaatctcc
 
-
301
 
-
taaattattt tatactagga tatcatctaa taagattgag gttagtaagt ggttaattaa ccttatataa acttttgtta cgacatttat tttttagagg
 
-
T9002
 
-
C0062
 
-
luxR
 
-
aaatgtaatt aaagaagcga aaacatcagg tcttatcact gggtttagtt tccctattca tacggctaac aatggcttcg gaatgcttag ttttgcacat
 
-
401
 
-
tttacattaa tttcttcgct tttgtagtcc agaatagtga cccaaatcaa agggataagt atgccgattg ttaccgaagc cttacgaatc aaaacgtgta
 
-
T9002
 
-
C0062
 
-
luxR
 
-
tcagaaaaag acaactatat agatagttta tttttacatg cgtgtatgaa cataccatta attgttcctt ctctagttga taattatcga aaaataaata
 
-
501
 
-
agtctttttc tgttgatata tctatcaaat aaaaatgtac gcacatactt gtatggtaat taacaaggaa gagatcaact attaatagct ttttatttat
 
-
T9002
 
-
C0062
 
-
luxR
 
-
A
 
-
tagcaaataa taaatcaaac aacgatttaa ccaaaagaga aaaagaatgt ttagcgtggg catgcgaagg aaaaagctct tgggatattt caaaaatatt
 
-
601
 
-
atcgtttatt atttagtttg ttgctaaatt ggttttctct ttttcttaca aatcgcaccc gtacgcttcc tttttcgaga accctataaa gtttttataa
 
-
T9002
 
-
C0062
 
-
luxR
 
-
aggttgcagt gagcgtactg tcactttcca tttaaccaat gcgcaaatga aactcaatac aacaaaccgc tgccaaagta tttctaaagc aattttaaca
 
-
701
 
-
tccaacgtca ctcgcatgac agtgaaaggt aaattggtta cgcgtttact ttgagttatg ttgtttggcg acggtttcat aaagatttcg ttaaaattgt
 
-
T9002
 
-
C0062
 
-
luxR
 
-
ggagcaattg attgcccata ctttaaaaat taataacact gatagtgcta gtgtagatca ctactagagc caggcatcaa ataaaacgaa aggctcagtc
 
-
801
 
-
cctcgttaac taacgggtat gaaattttta attattgtga ctatcacgat cacatctagt gatgatctcg gtccgtagtt tattttgctt tccgagtcag
 
-
T9002
 
-
C0062
 
-
B0010
 
-
luxR
 
-
gaaagactgg gcctttcgtt ttatctgttg tttgtcggtg aacgctctct actagagtca cactggctca ccttcgggtg ggcctttctg cgtttatata
 
-
901
 
-
ctttctgacc cggaaagcaa aatagacaac aaacagccac ttgcgagaga tgatctcagt gtgaccgagt ggaagcccac ccggaaagac gcaaatatat
 
-
T9002
 
-
B0010
 
-
B0012
 
-
Stop
 
-
T7 TE
 
-
PolyA
 
-
ctagagacct gtaggatcgt acaggtttac gcaagaaaat ggtttgttat agtcgaataa atactagagt cacacaggaa agtactagat gcgtaaagga
 
-
1001
 
-
gatctctgga catcctagca tgtccaaatg cgttctttta ccaaacaata tcagcttatt tatgatctca gtgtgtcctt tcatgatcta cgcatttcct
 
-
T9002
 
-
E0040
 
-
R0062
 
-
B0032
 
-
-35
 
-
-10
 
-
RBS-3Weak
 
-
RBS
 
-
LuxR/HSL
 
-
gaagaacttt tcactggagt tgtcccaatt cttgttgaat tagatggtga tgttaatggg cacaaatttt ctgtcagtgg agagggtgaa ggtgatgcaa
 
-
1101
 
-
cttcttgaaa agtgacctca acagggttaa gaacaactta atctaccact acaattaccc gtgtttaaaa gacagtcacc tctcccactt ccactacgtt
 
-
T9002
 
-
E0040
 
-
catacggaaa acttaccctt aaatttattt gcactactgg aaaactacct gttccatggc caacacttgt cactactttc ggttatggtg ttcaatgctt
 
-
1201
 
-
gtatgccttt tgaatgggaa tttaaataaa cgtgatgacc ttttgatgga caaggtaccg gttgtgaaca gtgatgaaag ccaataccac aagttacgaa
 
-
T9002
 
-
E0040
 
-
tgcgagatac ccagatcata tgaaacagca tgactttttc aagagtgcca tgcccgaagg ttatgtacag gaaagaacta tatttttcaa agatgacggg
 
-
1301
 
-
acgctctatg ggtctagtat actttgtcgt actgaaaaag ttctcacggt acgggcttcc aatacatgtc ctttcttgat ataaaaagtt tctactgccc
 
-
T9002
 
-
E0040
 
-
aactacaaga cacgtgctga agtcaagttt gaaggtgata cccttgttaa tagaatcgag ttaaaaggta ttgattttaa agaagatgga aacattcttg
 
-
1401
 
-
ttgatgttct gtgcacgact tcagttcaaa cttccactat gggaacaatt atcttagctc aattttccat aactaaaatt tcttctacct ttgtaagaac
 
-
T9002
 
-
E0040
 
-
gacacaaatt ggaatacaac tataactcac acaatgtata catcatggca gacaaacaaa agaatggaat caaagttaac ttcaaaatta gacacaacat
 
-
1501
 
-
ctgtgtttaa ccttatgttg atattgagtg tgttacatat gtagtaccgt ctgtttgttt tcttacctta gtttcaattg aagttttaat ctgtgttgta
 
-
T9002
 
-
E0040
 
-
tgaagatgga agcgttcaac tagcagacca ttatcaacaa aatactccaa ttggcgatgg ccctgtcctt ttaccagaca accattacct gtccacacaa
 
-
1601
 
-
acttctacct tcgcaagttg atcgtctggt aatagttgtt ttatgaggtt aaccgctacc gggacaggaa aatggtctgt tggtaatgga caggtgtgtt
 
-
T9002
 
-
E0040
 
-
tctgcccttt cgaaagatcc caacgaaaag agagaccaca tggtccttct tgagtttgta acagctgctg ggattacaca tggcatggat gaactataca
 
-
1701
 
-
agacgggaaa gctttctagg gttgcttttc tctctggtgt accaggaaga actcaaacat tgtcgacgac cctaatgtgt accgtaccta cttgatatgt
 
-
T9002
 
-
E0040
 
-
aataataata ctagagccag gcatcaaata aaacgaaagg ctcagtcgaa agactgggcc tttcgtttta tctgttgttt gtcggtgaac gctctctact
 
-
1801
 
-
ttattattat gatctcggtc cgtagtttat tttgctttcc gagtcagctt tctgacccgg aaagcaaaat agacaacaaa cagccacttg cgagagatga
 
-
T9002
 
-
E0040
 
-
B0010
 
-
agagtcacac tggctcacct tcgggtgggc ctttctgcgt ttatatacta gaggaagatc ttccggatcc ggtactagag aaagaggaga aatactagat
 
-
1901
 
-
tctcagtgtg accgagtgga agcccacccg gaaagacgca aatatatgat ctccttctag aaggcctagg ccatgatctc tttctcctct ttatgatcta
 
-
T9002
 
-
I732094
 
-
I732006
 
-
B0012
 
-
I732007
 
-
B0034
 
-
lacZ
 
-
Stop
 
-
T7 TE
 
-
BglII
 
-
BamHI
 
-
PolyA
 
-
START
 
-
gaccatgatt acggattcac tggccgtcgt tttacaacgt cgtgactggg aaaaccctgg cgttacccaa cttaatcgcc ttgcagcaca tccccctttc
 
-
2001
 
-
ctggtactaa tgcctaagtg accggcagca aaatgttgca gcactgaccc ttttgggacc gcaatgggtt gaattagcgg aacgtcgtgt agggggaaag
 
-
I732094
 
-
I732006
 
-
lacZ
 
-
START
 
-
gccagctggc gtaatagcga agaggcccgc accgatcgcc cttcccaaca gttgcgcagc ctgaatggcg aatggcgctt tgcctggttt ccggcaccag
 
-
2101
 
-
cggtcgaccg cattatcgct tctccgggcg tggctagcgg gaagggttgt caacgcgtcg gacttaccgc ttaccgcgaa acggaccaaa ggccgtggtc
 
-
I732094
 
-
I732006
 
-
lacZ
 
-
aagcggtgcc ggaaagctgg ctggagtaat aatactagag aaagaggaga aatactagat gcgtaaagga gaagaacttt tcactggagt tgtcccaatt
 
-
2201
 
-
ttcgccacgg cctttcgacc gacctcatta ttatgatctc tttctcctct ttatgatcta cgcatttcct cttcttgaaa agtgacctca acagggttaa
 
-
I732094
 
-
E0044
 
-
I732006
 
-
B0034
 
-
lacZ
 
-
STOP
 
-
cttgttgaat tagatggtga tgttaatggg cacaaatttt ctgtcagtgg agagggtgaa ggtgatgcaa catacggaaa acttaccctt aaatttattt
 
-
2301
 
-
gaacaactta atctaccact acaattaccc gtgtttaaaa gacagtcacc tctcccactt ccactacgtt gtatgccttt tgaatgggaa tttaaataaa
 
-
I732094
 
-
E0044
 
-
gcactactgg aaaactacct gttccatggc caacacttgt cactactttc ggttatggtg ttcaatgctt tgcgagatac ccagatcata tgaaacagca
 
-
2401
 
-
cgtgatgacc ttttgatgga caaggtaccg gttgtgaaca gtgatgaaag ccaataccac aagttacgaa acgctctatg ggtctagtat actttgtcgt
 
-
I732094
 
-
E0044
 
-
tgactttttc aagagtgcca tgcccgaagg ttatgtacag gaaagaacta tatttttcaa agatgacggg aactacaaga cacgtgctga agtcaagttt
 
-
2501
 
-
actgaaaaag ttctcacggt acgggcttcc aatacatgtc ctttcttgat ataaaaagtt tctactgccc ttgatgttct gtgcacgact tcagttcaaa
 
-
I732094
 
-
E0044
 
-
gaaggtgata cccttgttaa tagaatcgag ttaaaaggta ttgattttaa agaagatgga aacattcttg gacacaaatt ggaatacaac tataactcac
 
-
2601
 
-
cttccactat gggaacaatt atcttagctc aattttccat aactaaaatt tcttctacct ttgtaagaac ctgtgtttaa ccttatgttg atattgagtg
 
-
I732094
 
-
E0044
 
-
acaatgtata catcatggca gacaaacaaa agaatggaat caaagttaac ttcaaaatta gacacaacat tgaagatgga agcgttcaac tagcagacca
 
-
2701
 
-
tgttacatat gtagtaccgt ctgtttgttt tcttacctta gtttcaattg aagttttaat ctgtgttgta acttctacct tcgcaagttg atcgtctggt
 
-
I732094
 
-
E0044
 
-
ttatcaacaa aatactccaa ttggcgatgg ccctgtcctt ttaccagaca accattacct gtccacacaa tctgcccttt cgaaagatcc caacgaaaag
 
-
2801
 
-
aatagttgtt ttatgaggtt aaccgctacc gggacaggaa aatggtctgt tggtaatgga caggtgtgtt agacgggaaa gctttctagg gttgcttttc
 
-
I732094
 
-
E0044
 
-
agagaccaca tggtccttct tgagtttgta acagctgctg ggattacaca tggcatggat gaactataca aaaggcctgc tgcaaacgac gaaaactacg
 
-
2901
 
-
tctctggtgt accaggaaga actcaaacat tgtcgacgac cctaatgtgt accgtaccta cttgatatgt tttccggacg acgtttgctg cttttgatgc
 
-
I732094
 
-
E0044
 
-
ctgctgctgt ttaataatac tagagccagg catcaaataa aacgaaaggc tcagtcgaaa gactgggcct ttcgttttat ctgttgtttg tcggtgaacg
 
-
3001
 
-
gacgacgaca aattattatg atctcggtcc gtagtttatt ttgctttccg agtcagcttt ctgacccgga aagcaaaata gacaacaaac agccacttgc
 
-
I732094
 
-
E0044
 
-
B0010
 
-
ctctctacta gagtcacact ggctcacctt cgggtgggcc tttctgcgtt tata
 
-
3101
 
-
gagagatgat ctcagtgtga ccgagtggaa gcccacccgg aaagacgcaa atat
 
-
I732094
 
-
B0010
 
-
B0012
 
-
Stop
 
-
T7 TE
 
-
PolyA
 
-
p(tetR)
 
-
 
-
R0040
 
-
 
-
.
 
-
 
-
B0034
 
-
 
-
luxr
 
-
 
-
C0062
 
-
 
-
.
 
-
 
-
B0010
 
-
 
-
.
 
-
 
-
B0012
 
-
 
-
lux pR
 
-
 
-
R0062
 
-
 
-
.
 
-
 
-
B0032
 
-
 
-
GFP
 
-
 
-
E0040
 
-
 
-
.
 
-
 
-
B0010
 
-
 
-
.
 
-
 
-
B0012
 
-
 
-
Adapter
 
-
 
-
I732007
 
-
 
-
.
 
-
 
-
B0034
 
-
 
-
lacZ-alpha
 
-
 
-
I732006
 
-
 
-
.
 
-
 
-
B0034
 
-
 
-
.
 
-
 
-
E0044
 
-
 
-
.
 
-
 
-
B0010
 
-
 
-
.
 
-
 
-
B0012
 
Assembly Compatibility:
Assembly Compatibility:

Revision as of 19:29, 26 October 2010



Part:BBa_K498000

Designed by IvyTech_South-Bend Team Group: iGEM10_IvyTechSBend-IN-USA (2010-10-26) From partsregistry.org


T9002 - LacZ

The T9002 AHL detector was ligated to a LacZ reporter gene by the conventional biobrick assembly #10.


Assembly Compatibility:

   * 10
     COMPATIBLE WITH RFC[10]
   * 12
     COMPATIBLE WITH RFC[12]
   * 21
     INCOMPATIBLE WITH RFC[21]
     Illegal BglII site found at 1956
     Illegal BamHI site found at 1965
   * 23
     COMPATIBLE WITH RFC[23]
   * 25
     COMPATIBLE WITH RFC[25]


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