Team:HokkaidoU Japan/Notebook/August27

From 2010.igem.org

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Latest revision as of 01:13, 28 October 2010

Notebook

Transfer 1-1A on pSB1A10 to pSB1C3

1.estimated concentrations of pSB1C3 and 1-1A which was amplified by miniprep before

2.mixed solutions according to the table below


Reagent Amount
pSB1C3 5 uL
DW 75 uL
10x M Buffer 10 uL
0.1%BSA 10 uL
EcoRI 5 uL
PstI 5 uL
Total 100 uL
Reagent Amount
1-1A 8 uL
DW 6 uL
10x M Buffer 2 uL
0.1%BSA 2 uL
EcoRI 1 uL
PstI 1 uL
Total 20 uL













3.incubated at 37C for 60min

4.purified the two samples

5.added 250 uL 100% EtOH to each samples

6.centrifuged at 4C, 15000rpm for 10 min

7.discarded supernatant

8.put the samples into desiccator

9.added 10 uL DW to pSB1C3 and 2 uL DW to 1-1A

10.mixed 1 uL pSB1C3 and 2 uL 1-1A

11.added 3 uL ligation solution and 0.5 uL T4 ligase

12.transfered the sample to a tube of 500 uL

13.incubated at 16C for 30 min

->For not putting 3M CH3COONa into the solutions,we stopped operation up to this.


Preparation of 3 Piece Ligation

  • Parts Information
Name Biobrick Name Well Length
Heat Sensor BBa_K098995 3-1E 937 bp
RBS BBa_B0034 1-2M 12 bp
RFP BBa_E1010 1-18F 681 bp
Double Terminator BBa_0015 1-23L 129 bp


1.estimated concentrations of Heat Sensor,RBS,RFP and Double Terminator

2.mixed solutions according to the table below

Reagent Amount
DW 13.5 uL
10x M buffer 5 uL
0.1%BSA 5 uL
EcoRI 3 uL
SpeI 1 uL
Heat Sensor 22.5 uL
Total 50 uL
Reagent Amount
DW 34.9 uL
10x M buffer 5 uL
0.1%BSA 5 uL
XbaI 1 uL
PstI 2 uL
RBS 34.9 uL
Total 50 uL













Reagent Amount
DW 25.5 uL
10x M buffer 5 uL
0.1%BSA 5 uL
EcoRI 3 uL
SpeI 1 uL
RFP 10.5 uL
Total 50 uL
Reagent Amount
DW 34 uL
10x M buffer 5 uL
0.1%BSA 5 uL
XbaI 1 uL
PstI 2 uL
Double Terminator 3 uL
Total 50 uL
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