Team:Heidelberg/Modeling/miGUI

From 2010.igem.org

(Difference between revisions)
Line 15: Line 15:
<script type="text/javascript">
<script type="text/javascript">
 +
/* tissuearray = tissuearray.split(";");
/* tissuearray = tissuearray.split(";");
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var dataarray = new Array(11);
var dataarray = new Array(11);
-
d = document
+
var d = document
-
dforms = d.forms
+
var dforms = d.forms
function sendall() {
function sendall() {
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}
}
-
document.getElementById("targetselection").src = scriptoutput;
+
document.getElementById("iframe"+num).src = scriptoutput;
}
}
}
}
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readvar(num, "giveinput");
readvar(num, "giveinput");
switch (num) {
switch (num) {
 +
 +
case 6: scriptoutput = 'http://igem.bioquant.uni-heidelberg.de/cgi-bin/igem_2010/execteststefan.pl?input1=' + dataarray[num][0] + '&input2=' + dataarray[num][1];
 +
//case 6: scriptoutput = 'test.htm'
 +
break;
 +
case 7: scriptoutput = 'http://igem.bioquant.uni-heidelberg.de/cgi-bin/igem_2010/aastha.pl?miRBStarget=' + dataarray[num][0] + '&miRBSofftarget=' + dataarray[num][1] + '&miRBSonofftarget=' + dataarray[num][2] + '&outmiRBStreshold=' + dataarray[num][3];
case 7: scriptoutput = 'http://igem.bioquant.uni-heidelberg.de/cgi-bin/igem_2010/aastha.pl?miRBStarget=' + dataarray[num][0] + '&miRBSofftarget=' + dataarray[num][1] + '&miRBSonofftarget=' + dataarray[num][2] + '&outmiRBStreshold=' + dataarray[num][3];
break;
break;
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function click() {
function click() {
-
alert(window.frames['targetselection'].a)
+
alert(window.frames['iframe'+6].arrayKnockdown[2])
}
}
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</form></td></tr>
</form></td></tr>
<tr id="lowerinputform6" class="lowerinputform"><td>shR_BS:<form name="formout6">
<tr id="lowerinputform6" class="lowerinputform"><td>shR_BS:<form name="formout6">
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<input name="output6" type="text" size="30" maxlength="30">
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miRNA<br><input name="targetmiRNA" type="text" size="30" maxlength="30"><br>
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</form></td></tr>
+
Knockdown<br><input name="knockdown" type="text" size="30" maxlength="30"><br>
 +
</form>
 +
 +
<iframe  id="iframe6" name="iframe6" style="border:none; display:block;"></iframe></td></tr>
<tr id="lowerinputform7" class="lowerinputform"><td>miRNA_BS:<form name="formout7">
<tr id="lowerinputform7" class="lowerinputform"><td>miRNA_BS:<form name="formout7">
Target: <br/><select name="miRBStarget">
Target: <br/><select name="miRBStarget">
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</form>
</form>
-
<iframe id="targetselection" name="targetselection" style="border:none; display:none"></iframe> </td></tr>
+
<iframe id="iframe7" name="iframe7" style="border:none; display:block;"></iframe> </td></tr>
<tr id="lowerinputform8" class="lowerinputform"><td>Reference:<form name="formout8">
<tr id="lowerinputform8" class="lowerinputform"><td>Reference:<form name="formout8">
<input name="output8" type="text" size="30" maxlength="30">
<input name="output8" type="text" size="30" maxlength="30">
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</td></tr>
</td></tr>
<tr id="rightinputform6" class="forms"><td>
<tr id="rightinputform6" class="forms"><td>
-
<p>Text Text Text Text <br> Text Text Text Text <br></p>
+
<p>Please enter your target miRNA and the desired knockdown<br></p>
<form name="giveinput6">
<form name="giveinput6">
-
<p>Variable5<br><input name="variable6" type="text" size="30" maxlength="30"></p>
+
miRNA<br><input name="targetmiRNA" type="text" size="30" maxlength="30" value="UUUUUUUUUUUUUUUUUUUUUU"><br>
 +
Knockdown<br><input name="knockdown" type="text" size="30" maxlength="30" value="0.5"><br>
<input type="button" value="Submit" onClick="getvar(6);"></form>
<input type="button" value="Submit" onClick="getvar(6);"></form>
</td></tr>
</td></tr>

Revision as of 18:44, 24 October 2010

click

GUI_Picture shRNAmir Promoter_1 Promoter_2 Operator miGene shR_BS miR_BS Reference tet-R_Promoter tet-Repressor tet-miR_BS Virus

shRNAmir:
Promoter 1:
Promoter 2:
Operator:
miGene:
shR_BS:
miRNA

Knockdown

miRNA_BS:
Target:

Off-Target:

On: Off:
Treshold:
Reference:
tet-Promotor:
tet-Repressor:
tet-miR_BS:
Virus:

Give shRNAmiR

Choose your first promoter

Choose your second promoter

Text Text Text Text
Text Text Text Text

Variable3

Text Text Text Text
Text Text Text Text

Variable4

Please enter your target miRNA and the desired knockdown

miRNA

Knockdown

miRBS

Choose your Target:

Choose your Off-Targets:

On-Targeting Off-Targeting

Set relative miRNA treshold

Text Text Text Text
Text Text Text Text

Variable6

Text Text Text Text
Text Text Text Text

Variable7

Text Text Text Text
Text Text Text Text

Variable8

Text Text Text Text
Text Text Text Text

Variable9

Text Text Text Text
Text Text Text Text

Variable10