Team:Harvard/parts

From 2010.igem.org

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<tr><td>A5</td><td>ihpRNA Ger </td><td>Intron hairpin Ger Knockdown construct</td><td>chloramphenicol</td><td>-</td><td><a href="Ger.txt">ihpRNA GER</a></td></tr>
<tr><td>A5</td><td>ihpRNA Ger </td><td>Intron hairpin Ger Knockdown construct</td><td>chloramphenicol</td><td>-</td><td><a href="Ger.txt">ihpRNA GER</a></td></tr>
-
<tr><td>F1</td><td>pENTCUP2 promoter</td><td>Plant specific promoter.  Used to drive expression of our flavor constructs in plants. </td><td></td><td></td><td></td></tr>
+
<tr><td>F1</td><td>pENTCUP2 promoter</td><td>Plant specific promoter.  Used to drive expression of our flavor constructs in plants. </td><td>chloramphenicol</td><td>-</td><td></td></tr>
-
<tr><td>F2</td><td>NOSt terminator</td><td>Plant specific terminator.  Terminates transcription but no stop codon on end.</td><td></td><td></td><td></td></tr>
+
<tr><td>F2</td><td>NOSt terminator</td><td>Plant specific terminator.  Terminates transcription but no stop codon on end.</td><td>chloramphenicol</td><td>-</td><td></td></tr>
-
<tr><td>F3</td><td>NOSt terminator + stop</td><td>Plant specific terminator.  Terminates transcription with stop codon on end.</td><td></td><td></td><td></td></tr>
+
<tr><td>F3</td><td>NOSt terminator + stop</td><td>Plant specific terminator.  Terminates transcription with stop codon on end.</td><td>chloramphenicol</td><td>-</td><td></td></tr>
-
<tr><td>F4</td><td>Brazzein</td><td>Sweet-tasting protein.  54 amino acid sequence. </td><td></td><td></td><td></td></tr>
+
<tr><td>F4</td><td>Brazzein</td><td>Sweet-tasting protein.  54 amino acid sequence. </td><td>chloramphenicol</td><td>-</td><td></td></tr>
-
<tr><td>F5</td><td>Miraculin</td><td>Taste-inverting protein turns sour to sweet.  191 amino acid sequence</td><td></td><td></td><td></td></tr>
+
<tr><td>F5</td><td>Miraculin</td><td>Taste-inverting protein turns sour to sweet.  191 amino acid sequence</td><td>chloramphenicol</td><td>-</td><td></td></tr>
-
<tr><td>F6</td><td>Brazzein YFP2x C-terminus</td><td>Brazzein with two Yellow Fluorescent Protein sequences on C-Terminus.  Allows visualization of expression</td><td></td><td></td><td></td></tr>
+
<tr><td>F6</td><td>Brazzein YFP2x C-terminus</td><td>Brazzein with two Yellow Fluorescent Protein sequences on C-Terminus.  Allows visualization of expression</td><td>chloramphenicol</td><td>-</td><td></td></tr>
-
<tr><td>F7</td><td>Miraculin YFP2x C-terminus</td><td>Miraculin with two Yellow Fluorescent Protein sequences on C-Terminus. Allows visualization of expression</td><td></td><td></td><td></td></tr>
+
<tr><td>F7</td><td>Miraculin YFP2x C-terminus</td><td>Miraculin with two Yellow Fluorescent Protein sequences on C-Terminus. Allows visualization of expression</td><td>chloramphenicol</td><td>-</td><td></td></tr>
-
<tr><td>F8</td><td>Brazzein StrepII C-terminus</td><td>Brazzein with StrepII tag on C-terminus for Western Blot.</td><td></td><td></td><td></td></tr>
+
<tr><td>F8</td><td>Brazzein StrepII C-terminus</td><td>Brazzein with StrepII tag on C-terminus for Western Blot.</td><td>chloramphenicol</td><td>-</td><td></td></tr>
-
<tr><td>F9</td><td>Miraculin StrepII C-terminus</td><td>Miraculin with StrepII tag on C-terminus for Western Blot.</td><td></td><td></td><td></td></tr>
+
<tr><td>F9</td><td>Miraculin StrepII C-terminus</td><td>Miraculin with StrepII tag on C-terminus for Western Blot.</td><td>chloramphenicol</td><td>-</td><td></td></tr>
-
<tr><td>BBa_K382010</td><td>amiRNA LUT2</td><td>amiRNA construct for lycopene epsilon cyclase (LUT2)knockdown</td><td></td><td></td><td></td></tr>
+
<tr><td>BBa_K382010</td><td>amiRNA LUT2</td><td>amiRNA construct for lycopene epsilon cyclase (LUT2)knockdown</td><td>chloramphenicol</td><td>-</td><td></td></tr>
-
<tr><td>BBa_K382011</td><td>amiRNA BETA-OHASE 1</td><td>amiRNA construct for carotene beta-ring hydroxylase (BETA-OHASE 1) knockdown</td><td></td><td></td><td></td></tr>
+
<tr><td>BBa_K382011</td><td>amiRNA BETA-OHASE 1</td><td>amiRNA construct for carotene beta-ring hydroxylase (BETA-OHASE 1) knockdown</td><td>chloramphenicol</td><td>-</td><td></td></tr>
-
<tr><td>BBa_K382012</td><td>amiRNA LYC</td><td>amiRNA construct for lycopene beta cyclase (LYC) knockdown</td><td></td><td></td><td></td></tr>
+
<tr><td>BBa_K382012</td><td>amiRNA LYC</td><td>amiRNA construct for lycopene beta cyclase (LYC) knockdown</td><td>chloramphenicol</td><td>-</td><td></td></tr>
<tr><td>GF1</td><td>Barnase</td><td> Fatal gene for the genetic fence </td><td>chloramphenicol</td><td>-</td><td></td></tr>
<tr><td>GF1</td><td>Barnase</td><td> Fatal gene for the genetic fence </td><td>chloramphenicol</td><td>-</td><td></td></tr>
<tr><td>GF2</td><td>Barstar</td><td>Protein inhibitor of Barnase</td><td>chloramphenicol</td><td>-</td><td></td></tr>
<tr><td>GF2</td><td>Barstar</td><td>Protein inhibitor of Barnase</td><td>chloramphenicol</td><td>-</td><td></td></tr>
-
<tr><td>GF3</td><td>LacIN</td><td>Lac Inhibitor with Nuclear Localization sequence - transcriptional inhibitor of the Act2LacO promoter</td><td>chloramphenicol</td><td></td></tr>
+
<tr><td>GF3</td><td>LacIN</td><td>Lac Inhibitor with Nuclear Localization sequence - transcriptional inhibitor of the Act2LacO promoter</td><td>chloramphenicol</td><td></td> </tr>
<tr><td>GF4</td><td>RXRLc-VP16</td><td> Fusion protein of Locust Retinoic Acid Receptor and VP16 activation domain - binds EcR-Gal4 in presence of Methoxyfenozide</td><td>chloramphenicol</td><td>-</td><td></td></tr>
<tr><td>GF4</td><td>RXRLc-VP16</td><td> Fusion protein of Locust Retinoic Acid Receptor and VP16 activation domain - binds EcR-Gal4 in presence of Methoxyfenozide</td><td>chloramphenicol</td><td>-</td><td></td></tr>
<tr><td>GF5</td><td>EcR-Gal4</td><td> Fusion protein of Ecdysone receptor and Gal4 DNA binding domain - binds RXRLc-VP16 and initiates transcription downstream of Gal Upstream Activating Sequence in presence of Methoxyfenozide </td><td>chloramphenicol</td><td>-</td><td></td></tr>
<tr><td>GF5</td><td>EcR-Gal4</td><td> Fusion protein of Ecdysone receptor and Gal4 DNA binding domain - binds RXRLc-VP16 and initiates transcription downstream of Gal Upstream Activating Sequence in presence of Methoxyfenozide </td><td>chloramphenicol</td><td>-</td><td></td></tr>
</table>
</table>
<br /><br />
<br /><br />

Revision as of 05:47, 19 October 2010

parts and primers

NameOriginal NameDescriptionResistanceResistance (Plants)Sequence
V1pORE Open Series 1 (O1)Agrobacterium vector open seriesKanamycinpat
V2pORE Open Series 2 (O2)Agrobacterium vector open seriesKanamycinnptII
V3pORE Expression Series 3 (E3)Agrobacterium vector with ENTCUP2 promoterKanamycinpat
V4pORE Expression Series 4 (E4)Agrobacterium vector with ENTCUP2 promoterKanamycinnptII
V5pORE Reporter Series 1 (R1)Agrobacterium vector with gusA reporterKanamycinnptII
V6pORE Reporter Series 3 (R3)Agrobacterium vector with smgfp reporterKanamycinnptII
V7
-
Agrobacterium vector open series with biobrick cloning siteKanamycinpat
V8
-
Agrobacterium vector open series with biobrick cloning siteKanamycinnptII
V9
-
Agrobacterium vector with ENTCUP2 promoter and biobrick cloning siteKanamycinpat
V10
-
Agrobacterium vector with ENTCUP2 promoter and biobrick cloning siteKanamycinnptII
V11
-
Agrobacterium vector with gusA reporter and biobrick cloning siteKanamycinnptII
V12
-
Agrobacterium vector with smgfp reporter and biobrick cloning siteKanamycinnptII
A1amiRNA GFPGFP knockdown constructchloramphenicol- amirnaGFP
A2amiRNA LTP LTP knockdown constructchloramphenicol- amiRNA LTP
A3ihpRNA BetIntron hairpin Bet Knockdown constructchloramphenicol- ihpRNA Bet1
A4ihpRNA LTPIntron hairpin LTP Knockdown constructchloramphenicol-ihpRNA LTP
A5ihpRNA Ger Intron hairpin Ger Knockdown constructchloramphenicol-ihpRNA GER
F1pENTCUP2 promoterPlant specific promoter. Used to drive expression of our flavor constructs in plants. chloramphenicol-
F2NOSt terminatorPlant specific terminator. Terminates transcription but no stop codon on end.chloramphenicol-
F3NOSt terminator + stopPlant specific terminator. Terminates transcription with stop codon on end.chloramphenicol-
F4BrazzeinSweet-tasting protein. 54 amino acid sequence. chloramphenicol-
F5MiraculinTaste-inverting protein turns sour to sweet. 191 amino acid sequencechloramphenicol-
F6Brazzein YFP2x C-terminusBrazzein with two Yellow Fluorescent Protein sequences on C-Terminus. Allows visualization of expressionchloramphenicol-
F7Miraculin YFP2x C-terminusMiraculin with two Yellow Fluorescent Protein sequences on C-Terminus. Allows visualization of expressionchloramphenicol-
F8Brazzein StrepII C-terminusBrazzein with StrepII tag on C-terminus for Western Blot.chloramphenicol-
F9Miraculin StrepII C-terminusMiraculin with StrepII tag on C-terminus for Western Blot.chloramphenicol-
BBa_K382010amiRNA LUT2amiRNA construct for lycopene epsilon cyclase (LUT2)knockdownchloramphenicol-
BBa_K382011amiRNA BETA-OHASE 1amiRNA construct for carotene beta-ring hydroxylase (BETA-OHASE 1) knockdownchloramphenicol-
BBa_K382012amiRNA LYCamiRNA construct for lycopene beta cyclase (LYC) knockdownchloramphenicol-
GF1Barnase Fatal gene for the genetic fence chloramphenicol-
GF2BarstarProtein inhibitor of Barnasechloramphenicol-
GF3LacINLac Inhibitor with Nuclear Localization sequence - transcriptional inhibitor of the Act2LacO promoterchloramphenicol
GF4RXRLc-VP16 Fusion protein of Locust Retinoic Acid Receptor and VP16 activation domain - binds EcR-Gal4 in presence of Methoxyfenozidechloramphenicol-
GF5EcR-Gal4 Fusion protein of Ecdysone receptor and Gal4 DNA binding domain - binds RXRLc-VP16 and initiates transcription downstream of Gal Upstream Activating Sequence in presence of Methoxyfenozide chloramphenicol-