Team:Freiburg Software/User/Robots/Alignment

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Revision as of 11:06, 22 October 2010 by Niklas (Talk | contribs)

Alignobot

With Alignobot you can compare sequences by creating global and local alignments. Alignobot can be found at alignobot@appspot.com. Before you start an alignment be sure that you have 2 sequences selected in the workspace.

Global Alignments

Alignobot finds global alignments using the Needleman/Wunsch Algorithm.

In the main menu you can either select the default distance function or specify your own. Now click "Send" and Alignobot will calculate your alignment and display it:

Note: The display may slightly differ from this picture due to ongoing development.