Team:Freiburg Software/User/Robots/Alignment

From 2010.igem.org

(Difference between revisions)
Line 11: Line 11:
<p class="main">
<p class="main">
Alignobot finds global alignments using the Needleman/Wunsch Algorithm.
Alignobot finds global alignments using the Needleman/Wunsch Algorithm.
 +
</p>
 +
<div align="center" style="margin: 10px 10px 10px 10px;">
 +
<img src="https://static.igem.org/mediawiki/igem.org/1/1c/Freiburg_10_software_Global_alignment.png" />
 +
<p class="caption">
 +
wurstwasser </p>
 +
</div>
In the main menu you can either select the default distance function or specify your own.
In the main menu you can either select the default distance function or specify your own.
Now click "Send" and Alignobot will calculate your alignment and display it:
Now click "Send" and Alignobot will calculate your alignment and display it:

Revision as of 22:12, 21 October 2010

Alignobot

With Alignobot you can compare sequences by creating global and local alignments. Alignobot can be found at alignobot@appspot.com. Before you start an alignment be sure that you have 2 sequences selected in the workspace.

Global Alignments

Alignobot finds global alignments using the Needleman/Wunsch Algorithm.

wurstwasser

In the main menu you can either select the default distance function or specify your own. Now click "Send" and Alignobot will calculate your alignment and display it: