Team:Freiburg Software/User/Robots

From 2010.igem.org

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Here you see a list of all the robots we have created. Each robot comes with its own user guide that tells you exactly how to use them. The robots listed here are add-on robots for the main SynBioWave Robot described in the first part of the <a href="https://2010.igem.org/Team:Freiburg_Software/User/Guide"user guide</a>. That means they do not work without it. So first add the main robot to the wave and then the add-on robots you want to use.
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Many features SynBioWave offers are realized on a modular basis via add-on robots: Start with our main robot and dynamically adjust SynBioWave's functionality to your needs by adding add-on robots to the wave (see our <a href="https://2010.igem.org/Team:Freiburg_Software/User/Guide">user guide</a> for detailed instructions).</p>
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Below is a list of the most important add-on robots we created. Click the boxes to go to the user guides for the robots featuring a video tutorial for each robot.
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<a href="https://2010.igem.org/Team:Freiburg_Software/User/Robots/Alignment">
<a href="https://2010.igem.org/Team:Freiburg_Software/User/Robots/Alignment">
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<img src="https://static.igem.org/mediawiki/2010/e/eb/Freiburg_10_software_Icon_A.png" class="pic_100_auto" />
<h1>Alignment Robot</h1>
<h1>Alignment Robot</h1>
<p class="main">The Alignment robot is capable of comparing two sequences using global or local alignments.</p>
<p class="main">The Alignment robot is capable of comparing two sequences using global or local alignments.</p>
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<a href="https://2010.igem.org/Team:Freiburg_Software/User/Robots/Translation">
<a href="https://2010.igem.org/Team:Freiburg_Software/User/Robots/Translation">
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<h1>Translation Robot</h1>
<h1>Translation Robot</h1>
<p class="main">The Translation Robot finds open reading frames (ORFs) and translates them into protein.</p>
<p class="main">The Translation Robot finds open reading frames (ORFs) and translates them into protein.</p>
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<a href="https://2010.igem.org/Team:Freiburg_Software/User/Robots/REBase">
<a href="https://2010.igem.org/Team:Freiburg_Software/User/Robots/REBase">
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<h1>REBase Robot</h1>
<h1>REBase Robot</h1>
<p class="main">The ReBase robot helps you find out where restriction enzymes attach to your sequence and cut.</p>
<p class="main">The ReBase robot helps you find out where restriction enzymes attach to your sequence and cut.</p>
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<a href="https://2010.igem.org/Team:Freiburg_Software/User/Robots/PrimerDesigner">
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<h1>Primer Designer</h1>
<h1>Primer Designer</h1>
<p class="main">The Primer Designer helps you design primers for PCR.</p>
<p class="main">The Primer Designer helps you design primers for PCR.</p>
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<a href="https://2010.igem.org/Team:Freiburg_Software/User/Robots/Blast">
<a href="https://2010.igem.org/Team:Freiburg_Software/User/Robots/Blast">
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<img src="http://www.molbiotech.uni-freiburg.de/iGEM/wiki2010/images/6/60/Freiburg_software_10_Icon_B.png" style="width: 100px; margin: 20px 0px 0px 20px" />
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<h1>BLAST Robot</h1>
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<h1>Blast Robot</h1>
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<p class="main">The BLAST Robot uses the NCBI Blast service to perform Blast searches.</p>
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<p class="main">The Blast robot uses the NCBI blast service to perform Blast searches.</p>
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<a href="https://2010.igem.org/Team:Freiburg_Software/User/Robots/Codon">
<a href="https://2010.igem.org/Team:Freiburg_Software/User/Robots/Codon">
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<img src="http://www.molbiotech.uni-freiburg.de/iGEM/wiki2010/images/0/00/Freiburg_software_10_Icon_C.png" class="pic_100_auto" />
<h1>Codon Usage Robot</h1>
<h1>Codon Usage Robot</h1>
<p class="main">The Organism likelihood Robot shows you how likely a sequence originates from a certain organism.</p>
<p class="main">The Organism likelihood Robot shows you how likely a sequence originates from a certain organism.</p>
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<a href="https://2010.igem.org/Team:Freiburg_Software/Special/CircularView" style="height: 185px">
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<h1><b>Special: Sequence View Gadget</b></h1>
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<p class="main">To be precise, the new Sequence View Gadget is not a separate robot, but part of the SynBioWave main robot. Nonetheless we want to present it in this context because it demonstrates how powerful Gadgets made with Google Web Toolkit (GWT) are and how the future of SynBioWave might look like.</p>
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Latest revision as of 03:00, 28 October 2010