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Team:Freiburg Software/Developer/Availability
From 2010.igem.org
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<h1>The Translation Robot(translate-beta@appspot.com)</h1> | <h1>The Translation Robot(translate-beta@appspot.com)</h1> | ||
<p class="main"> | <p class="main"> | ||
| - | The Translation robot finds Open Reading Frames (ORFs) and translates them into Protein. The source code can be downloaded from <a href="https://static.igem.org/mediawiki/2010/5/5f/Freiburg_10_Software_TranslateBotSource.zip">here</a>. | + | The Translation robot finds Open Reading Frames (ORFs) and translates them into Protein.<br> The source code can be downloaded from <a href="https://static.igem.org/mediawiki/2010/5/5f/Freiburg_10_Software_TranslateBotSource.zip">here</a>. |
</p> | </p> | ||
<h1>The Alignment Robot (alignbot@appspot.com)</h1> | <h1>The Alignment Robot (alignbot@appspot.com)</h1> | ||
<p class="main"> | <p class="main"> | ||
| - | The Alignment robot compares two sequences using global and local alignments. The source code can be downloaded from <a href="https://static.igem.org/mediawiki/2010/9/9b/Freiburg_10_Software_AlignmentRobotSource.zip">here</a>. | + | The Alignment robot compares two sequences using global and local alignments.<br> The source code can be downloaded from <a href="https://static.igem.org/mediawiki/2010/9/9b/Freiburg_10_Software_AlignmentRobotSource.zip">here</a>. |
</p> | </p> | ||
<h1>The REBase Robot (resenzymes-beta@appspot.com)</h1> | <h1>The REBase Robot (resenzymes-beta@appspot.com)</h1> | ||
<p class="main"> | <p class="main"> | ||
| - | The REBase robot finds where in the sequence the restriction sites attach and where they cut. The source code can be downloaded from <a href="https://static.igem.org/mediawiki/2010/e/e8/Freiburg_10_Software_REBaseBotSource.zip">here</a>. | + | The REBase robot finds where in the sequence the restriction sites attach and where they cut.<br> The source code can be downloaded from <a href="https://static.igem.org/mediawiki/2010/e/e8/Freiburg_10_Software_REBaseBotSource.zip">here</a>. |
</p> | </p> | ||
<h1>The Primer Design Robot (synbiowave-primerdesign@appspot.com)</h1> | <h1>The Primer Design Robot (synbiowave-primerdesign@appspot.com)</h1> | ||
<p class="main"> | <p class="main"> | ||
| - | The Primer Design Robot designs primers for PCRs. The source code can be downloaded from <a href="https://static.igem.org/mediawiki/2010/3/35/Freiburg_10_Software_PrimerDesignerSource.zip">here</a>. | + | The Primer Design Robot designs primers for PCRs.<br> The source code can be downloaded from <a href="https://static.igem.org/mediawiki/2010/3/35/Freiburg_10_Software_PrimerDesignerSource.zip">here</a>. |
</p> | </p> | ||
<h1>The Codon Usage Robot (likelihoodbot@appspot.com)</h1> | <h1>The Codon Usage Robot (likelihoodbot@appspot.com)</h1> | ||
<p class="main"> | <p class="main"> | ||
| - | The Codon Usage Robot shows how likely the sequence originates from the selected organism. | + | The Codon Usage Robot shows how likely the sequence originates from the selected organism.<br> |
The source code can be downloaded from <a href="https://static.igem.org/mediawiki/2010/8/81/Freiburg_10_Software_CodonUsageBotSource.zip">here</a> | The source code can be downloaded from <a href="https://static.igem.org/mediawiki/2010/8/81/Freiburg_10_Software_CodonUsageBotSource.zip">here</a> | ||
</p> | </p> | ||
<h1>The Blast Robot (synbiowave-blastbot@appspot.com)</h1> | <h1>The Blast Robot (synbiowave-blastbot@appspot.com)</h1> | ||
<p class="main"> | <p class="main"> | ||
| - | The Blast robot uses the NCBI blast service to perform Blast searches. The source can be downloaded from <a href="https://static.igem.org/mediawiki/2010/f/f7/Freiburg_10_Software_BlastRobotSource.zip">here</a>. | + | The Blast robot uses the NCBI blast service to perform Blast searches.<br> The source can be downloaded from <a href="https://static.igem.org/mediawiki/2010/f/f7/Freiburg_10_Software_BlastRobotSource.zip">here</a>. |
</p> | </p> | ||
Revision as of 19:09, 25 October 2010
Availability
SynBioWave is entirely open source. On this page we will show you how you can access the code. Normally our project is hosted on Sourceforge in addition we uploaded the latest program code to the iGEM wiki.
The SynBioWave Robot (synbiowave@appspot.com)
The SynBioWave robot is the main robot. One has to add it before he uses the Add-on robots.
The source can be downloaded from here
Add-On Robots
The Translation Robot(translate-beta@appspot.com)
The Translation robot finds Open Reading Frames (ORFs) and translates them into Protein.
The source code can be downloaded from here.
The Alignment Robot (alignbot@appspot.com)
The Alignment robot compares two sequences using global and local alignments.
The source code can be downloaded from here.
The REBase Robot (resenzymes-beta@appspot.com)
The REBase robot finds where in the sequence the restriction sites attach and where they cut.
The source code can be downloaded from here.
The Primer Design Robot (synbiowave-primerdesign@appspot.com)
The Primer Design Robot designs primers for PCRs.
The source code can be downloaded from here.
The Codon Usage Robot (likelihoodbot@appspot.com)
The Codon Usage Robot shows how likely the sequence originates from the selected organism.
The source code can be downloaded from here
The Blast Robot (synbiowave-blastbot@appspot.com)
The Blast robot uses the NCBI blast service to perform Blast searches.
The source can be downloaded from here.
