Team:Freiburg Software/Developer/Availability

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Revision as of 17:31, 24 October 2010

Availability

The SynBioWave Robot (synbiowave@appspot.com)

The SynBioWave robot is the main robot. One has to add it before he uses the Add-on robots.
The source can be downloaded from here

Add-On Robots

The Translation Robot(translate-beta@appspot.com)

The Translation robot finds Open Reading Frames (ORFs) and translates them into Protein. The source code can be downloaded from here.

The Alignment Robot (alignbot@appspot.com)

The Alignment robot compares two sequences using global and local alignments. The source code can be downloaded from here.

The REBase Robot (resenzymes-beta@appspot.com)

The REBase robot finds where in the sequence the restriction sites attach and where they cut. The source code can be downloaded from here.

The Primer Design Robot (synbiowave-primerdesign@appspot.com)

The Primer Design Robot designs primers for PCRs. The source code can be downloaded from here.

The Codon Usage Robot (likelihoodbot@appspot.com)

The Codon Usage Robot shows how likely the sequence originates from the selected organism. The source code can be downloaded from here

The Blast Robot (synbiowave-blastbot@appspot.com)

The Blast robot uses the NCBI blast service to perform Blast searches. The source can be downloaded from here.