Team:ETHZ Basel/Internal

From 2010.igem.org

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{{ETHZ_Basel10}}
 
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{{ETHZ_Basel10_Empty}}
 
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= Internal =
 
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This section will be removed before wiki-freeze!
 
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= Acknowledged problems/incomplete pages =
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Movement#Direction_changes plot (weird for tumbling state)
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Movement#Algorithm: replace running with directed movement in the image
 
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= General remarks =
 
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* '''Protein names''': normally written
 
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* '''gene names''': italic
 
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* '''Directed movement''' NOT running, please correct!
 
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* '''chemotaxis''' pathway NOT Chemotaxis nor chemotactic
 
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*  '''E. lemming''' with space
 
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* E. lemming vs THE E. lemming: E. lemming: Project name (whole assay), The E. lemming: One single genetically modified ''E. coli''
 
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* '''far-red light''', not far red light, please correct!
 
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* '''internal links''' - we should refer to other internal pages (hyperlinks) where appropriate, inside the paragraphs.
 
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= Suggestions =
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology:
 
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first paragraph, define 'anchor' and 'tumbling' and 'directed movement' before using the terms
 
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<br>second paragraph: quite unclear, if possible, add more details & explain more
 
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<br>add a few sentences (and link them) regarding ARL & Safety
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing
 
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50 &mu;m (?) high flow channel; remove question mark
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Chemotaxis
 
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THRESHOLD NOT DEFINED in ''Delta (initial value - threshold)''; write one line about the threshold and why it is important<br>
 
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plots might look weird (why in last plot, for CheZ, no line appears, not at 0)?
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/InformationFlow
 
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in second part of the page, 'cells with highest score'; define the score
 
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<br>clearly define the reference used: [1] Stuurman et al. 2007; could not uniquely identify it
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Light_Switch
 
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Original sentence 'It should be noticed that this signal changes with time constant in the range of hours' rephrased to:'It should be noticed that this signal constantly changes with time in the range of hours.' Revert if meaning changed.
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology/Implementation
 
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added reference [2]. would be good if a biologist can check if it's the right one. Looks like the page ends abruptly. something like a conclusion perhaps?
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Visualization 
 
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spacing, subheadings & some bullet points); suggesting more images for the user experience part
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/CellDetection
 
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Corrected minor spelling mistakes. Gave names to the 2 steps of the cell detection algorithm. Added subheadings to make it more readable & structured. Revert if necessary.
 
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* https://2010.igem.org/Team:ETHZ_Basel/Achievements/Medal_Criteria
 
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check with biology to keep it updated (check list)
 
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= Teaser =
 
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==Images==
 
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'''Simona''': Achievements image: increase resolution; Same for first image.<br>
 
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'''Thanuja''': a better picture to suggest what we have done? any creative ideas to make a better first impression?
 
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==Text==
 
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== General ==
 
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* Movies: '''George & Luzi''' Almost done, but needs speech! '''Elsa'''
 
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* Matlab Toolboxes: '''Moritz & George'''
 
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= Proofreading =
 
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===Introduction===
 
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* https://2010.igem.org/Team:ETHZ_Basel Please read every text of the teaser.
 
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* https://2010.igem.org/Team:ETHZ_Basel/Introduction/Motivation
 
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===Biology & Wet Laboratory===
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology '''Simona DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology/Molecular_Mechanism '''George DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology/Cloning '''George DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology/Implementation '''Thanuja DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology/Archean_Light_Receptor '''Elsa'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology/Safety '''Elsa'''
 
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===Mathematical Modeling===
 
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'''Christoph will do this by Sunday'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling : first proofreading '''Simona DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Light_Switch
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Chemotaxis: first proofreading '''Simona DONE''', See Suggestions above
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Movement
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Combined
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Experimental_Design
 
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===Information Processing===
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing '''Simona DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Microscope '''Simona DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/InformationFlow '''Simona DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/CellDetection '''Thanuja DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Visualization '''Thanuja DONE'''
 
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===Achievements===
 
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== Pick-a-task ==
 
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* https://2010.igem.org/Team:ETHZ_Basel: '''George DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Introduction/Motivation: '''Simona DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Introduction/Movie: '''George DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology: '''Simona DONE''' '''George DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology/Molecular_Mechanism: '''George DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology/Cloning: '''George DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology/Implementation: '''George DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology/Archean_Light_Receptor: Image: change font to Trebuchet MS, save as PNG, put Sequence into container, link references '''Elsa'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Biology/Safety: finish content '''Elsa, need help!'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling: '''Simona DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Light_Switch: '''Simona''' Shorten text
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Chemotaxis: '''Simona DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Movement: '''Simona DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Combined: '''Simona''' make coherent
 
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* https://2010.igem.org/Team:ETHZ_Basel/Modeling/Experimental_Design: '''George''' Plots are outdated! Replace with new ones! Status: Calculating...
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing: '''Simona DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Microscope: '''Simona DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/InformationFlow:'''Simona DONE'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/CellDetection'''Thanuja: Done'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Visualization'''Thanuja: Done'''
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Controller: '''Simona''' Check spaces between paragraphs
 
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* https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Game: Upload movie to ethzigem10 Youtube account
 
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* https://2010.igem.org/Team:ETHZ_Basel/Achievements: Will we have experimental date? Make otherwise overview of achievements.
 
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* https://2010.igem.org/Team:ETHZ_Basel/Achievements/BioBrick_Toolbox: finish content
 
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* https://2010.igem.org/Team:ETHZ_Basel/Achievements/Matlab_Toolbox: Arrange examples different. (remove spaces), correct references.
 
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* https://2010.igem.org/Team:ETHZ_Basel/Achievements/Interworking: '''Simona''' Finish content and decide upon final title.
 
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* https://2010.igem.org/Team:ETHZ_Basel/Achievements/Simulation: Upload movie to ethzigem10 Youtube account and finish content
 
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* https://2010.igem.org/Team:ETHZ_Basel/Achievements/Medal_Criteria: '''Thanuja: Done''' . have to check with biology to keep it updated (check list)
 
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* https://2010.igem.org/Team:ETHZ_Basel/Team: Moritz: 350*350px picture; Elsa one or two more sentences. '''Elsa DONE'''
 

Latest revision as of 11:22, 25 December 2010