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| - | {{ETHZ_Basel10}}
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| - | {{ETHZ_Basel10_Empty}}
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| - | = Internal =
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| - | This section will be removed before wiki-freeze!
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| - |
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| - | = Acknowledged problems/incomplete pages =
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Movement#Direction_changes plot (weird for tumbling state)
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Movement#Algorithm: replace running with directed movement in the image
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| - |
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| - | = General remarks =
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| - | * '''internal links''' - we should refer to other internal pages (hyperlinks) where appropriate, inside the paragraphs.
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| - |
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| - | * Protein names - bold or not?
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| - | '''Simona''': unbold them
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| - | '''Moritz''': put them in <var>...</var>, e.g. <var>PIF3</var>, or <var>PhyB</var>.
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| - | * Running or directed movement?
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| - | '''Simona''': running
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| - | '''Moritz''': directed movement sounds more scientific.
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| - | * chemotaxis pathway vs chemotactic pathway
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| - | '''Simona''': chemotaxis pathway
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| - | * chemotaxis vs Chemotaxis
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| - | '''Simona''': chemotaxis
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| - | * E.lemming vs E. lemming <br>
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| - | '''George''': It should be E. lemming (compared to E. coli); '''Simona''': E.coli is also E. coli?; '''Simona''': Yes, see Wikipedia...
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| - | * E. lemming vs THE E. lemming
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| - | '''George''': E. lemming: Project name (whole assay), The E. lemming: One single genetically modified ''E. coli''
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| - | * far red light vs far-red light vs any other form..
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| - | '''George''': According to Wikipedia: far-red
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| - |
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| - | = Suggestions =
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology:
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| - | first paragraph, define 'anchor' and 'tumbling' and 'directed movement' before using the terms
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| - | <br>second paragraph: quite unclear, if possible, add more details & explain more
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| - | <br>add a few sentences (and link them) regarding ARL & Safety
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing
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| - | 50 μm (?) high flow channel; remove question mark
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Chemotaxis
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| - | THRESHOLD NOT DEFINED in ''Delta (initial value - threshold)''; write one line about the threshold and why it is important<br>
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| - | plots might look weird (why in last plot, for CheZ, no line appears, not at 0)?
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/InformationFlow
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| - | in second part of the page, 'cells with highest score'; define the score
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| - | <br>clearly define the reference used: [1] Stuurman et al. 2007; could not uniquely identify it
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Light_Switch
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| - | Original sentence 'It should be noticed that this signal changes with time constant in the range of hours' rephrased to:'It should be noticed that this signal constantly changes with time in the range of hours.' Revert if meaning changed.
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| - |
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| - | = Open Tasks =
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| - | == General ==
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| - | * Movies: '''George & Luzi''' Almost done, but needs speech!
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| - | * Matlab Toolboxes: '''Moritz & George'''
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| - |
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| - | = Proofreading =
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| - |
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| - | ===Introduction===
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| - | * https://2010.igem.org/Team:ETHZ_Basel Please read every text of the teaser.
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Introduction/Motivation
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| - |
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| - | ===Biology & Wet Laboratory===
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology '''Simona DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology/Molecular_Mechanism '''George DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology/Cloning '''George DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology/Implementation '''Thanuja'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology/Archean_Light_Receptor '''Elsa'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology/Safety '''Elsa'''
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| - |
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| - | ===Mathematical Modeling===
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| - |
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| - | '''Christoph will do this by Sunday'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling : first proofreading '''Simona DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Light_Switch
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Chemotaxis: first proofreading '''Simona DONE''', See Suggestions above
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Movement
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Combined
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Experimental_Design
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| - |
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| - | ===Information Processing===
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing '''Simona DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Microscope '''Simona DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/InformationFlow '''Simona DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/CellDetection '''Thanuja''': '''Done'''. Corrected minor spelling mistakes. Gave names to the 2 steps of the cell detection algorithm. Added subheadings to make it more readable & structured. Revert if necessary.
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Visualization '''Thanuja''': Formatting done (spacing, subheadings & some bullet points). suggesting more images for the user experience part.
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| - |
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| - | ===Achievements===
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Achievements/Interworking '''Thanuja'''
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| - |
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| - | == Pick-a-task ==
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| - | * https://2010.igem.org/Team:ETHZ_Basel: '''George DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Introduction/Motivation: '''Simona DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Introduction/Movie: '''George DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology: '''Simona DONE''' '''George DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology/Molecular_Mechanism: '''George DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology/Cloning: '''George DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology/Implementation: '''George DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology/Archean_Light_Receptor: Image: change font to Trebuchet MS, save as PNG, put Sequence into container, link references
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Biology/Safety: finish content
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling: '''Simona DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Light_Switch: '''Simona''' Shorten text
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Chemotaxis: '''Simona DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Movement: '''Simona DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Combined: '''Simona''' make coherent
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Modeling/Experimental_Design: '''George''' Plots are outdated! Replace with new ones! Status: Calculating...
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing: '''Simona DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Microscope: '''Simona DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/InformationFlow:'''Simona DONE'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/CellDetection: Make paragraphs. '''Thanuja: Done'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Visualization: Make paragraphs.'''Thanuja: Done'''
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Controller: '''Simona''' Check spaces between paragraphs
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| - | * https://2010.igem.org/Team:ETHZ_Basel/InformationProcessing/Game: Upload movie to ethzigem10 Youtube account
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Achievements: Will we have experimental date? Make otherwise overview of achievements.
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Achievements/BioBrick_Toolbox: finish content
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Achievements/Matlab_Toolbox: Arrange examples different. (remove spaces), correct references.
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Achievements/Interworking: '''Simona''' Finish content and decide upon final title.
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Achievements/Simulation: Upload movie to ethzigem10 Youtube account and finish content
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Achievements/Medal_Criteria: '''Thanuja''' Criteria done. have to check with biology to keep it updated (check list)
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| - | * https://2010.igem.org/Team:ETHZ_Basel/Team: Moritz: 350*350px picture; Elsa one or two more sentences.
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