Team:ESBS-Strasbourg/Results/Device
From 2010.igem.org
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+ | |||
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</li> | </li> | ||
<li> | <li> | ||
- | <p><br/><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Team"> TEAM</a></p> | + | <p><br/><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Team"> |
+ | TEAM</a></p> | ||
<ul> | <ul> | ||
- | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Team">Overview</a></li> | + | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Team"> |
+ | Overview</a></li> | ||
<li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Team#under"> | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Team#under"> | ||
Students</a></li> | Students</a></li> | ||
- | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Team# | + | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Team#advisors"> |
Advisors</a></li> | Advisors</a></li> | ||
+ | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Team#instructors"> | ||
+ | Instructors</a></li> | ||
<li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Team#uni"> | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Team#uni"> | ||
Strasbourg</a></li> | Strasbourg</a></li> | ||
+ | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Team#collaboration"> | ||
+ | Collaboration</a></li> | ||
</ul> | </ul> | ||
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<li> | <li> | ||
<p><br /> | <p><br /> | ||
- | <a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project"> PROJECT</a></p> | + | <a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project"> |
+ | PROJECT</a></p> | ||
<ul> | <ul> | ||
- | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project">Overview</a></li> | + | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project"> |
+ | Overview</a></li> | ||
<li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project/Strategy"> | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project/Strategy"> | ||
Strategy</a></li> | Strategy</a></li> | ||
+ | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project/visual"> | ||
+ | Visual Description</a></li> | ||
<li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project/Application"> | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project/Application"> | ||
Application</a></li> | Application</a></li> | ||
- | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project/Acknowledgment">Acknowledgment</a></li> | + | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project/Acknowledgment"> |
+ | Acknowledgment</a></li> | ||
<li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project/Reference"> | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Project/Reference"> | ||
Reference</a></li> | Reference</a></li> | ||
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</li> | </li> | ||
<li> | <li> | ||
- | <p><br/><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Results"> RESULTS</a></p> | + | <p><br/><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Results/Biobricks"> |
+ | RESULTS</a></p> | ||
<ul> | <ul> | ||
- | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Results/Biobricks">Biobricks</a></li> | + | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Results/Biobricks"> |
+ | Biobricks</a></li> | ||
+ | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Results/Assembly"> | ||
+ | <font size="3">Biobrick Assembly Technique</font></a></li> | ||
<li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Results/Characterization"> | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Results/Characterization"> | ||
Characterization</a></li> | Characterization</a></li> | ||
- | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Results/ | + | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Results/Modelling"> |
- | + | Modeling</a></li> | |
+ | |||
</ul> | </ul> | ||
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</li> | </li> | ||
<li> | <li> | ||
- | <p><br/><a | + | <p><br/><a> |
+ | NOTEBOOK</a></p> | ||
<ul> | <ul> | ||
- | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Notebook/Syntethic">Synthetic Photoreceptors</a></li> | + | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Notebook/Syntethic"> |
+ | Synthetic Photoreceptors</a></li> | ||
<li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Notebook/Microfluidics"> | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Notebook/Microfluidics"> | ||
Microfluidics</a></li> | Microfluidics</a></li> | ||
- | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Notebook/Labbook">Lab-book</a></li> | + | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Results/Device">Lighting device</a></li> |
+ | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Notebook/Labbook"> | ||
+ | Lab-book</a></li> | ||
</ul> | </ul> | ||
</li> | </li> | ||
+ | |||
+ | <li> | ||
+ | <p><br/><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Humanpractice"> | ||
+ | HUMAN PRACTICE</a></p> | ||
+ | <ul> | ||
+ | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Humanpractice#organisation"> | ||
+ | Organisation</a></li> | ||
+ | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Humanpractice#survey"> | ||
+ | Survey</a></li> | ||
+ | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Humanpractice#video"> | ||
+ | The ClpX video</a></li> | ||
+ | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Humanpractice#game"> | ||
+ | The ClpX game</a></li> | ||
+ | <li><a href="https://2010.igem.org/Team:ESBS-Strasbourg/Humanpractice#safety"> | ||
+ | Project Safety</a></li> | ||
+ | |||
+ | </ul> | ||
+ | |||
+ | </li> | ||
+ | |||
<li class="last"> | <li class="last"> | ||
<p><br /> | <p><br /> | ||
- | <a href="https://2010.igem.org/Team:ESBS-Strasbourg/Sponsors"> SPONSORS</a></p> | + | <a href="https://2010.igem.org/Team:ESBS-Strasbourg/Sponsors"> |
+ | SPONSORS</a></p> | ||
</li> | </li> | ||
</ul> | </ul> | ||
+ | </div> | ||
+ | </div> | ||
</div> | </div> | ||
</div> | </div> | ||
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<tr> | <tr> | ||
<div id="leftmenu"> | <div id="leftmenu"> | ||
- | <td width=" | + | <td width="180" rowspan=7 bgcolor="#414141" valign="top"> |
<br> | <br> | ||
<div class="heading">Lighting device</div> | <div class="heading">Lighting device</div> | ||
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<a href="#Introduction">1. Introduction</a> | <a href="#Introduction">1. Introduction</a> | ||
<br> | <br> | ||
- | <a href="#Behavioral">2. | + | <a href="#Behavioral">2. Printed circuit board</a> |
<br> | <br> | ||
- | <a href="#Signalflow">3. | + | <a href="#Signalflow">3. Microcontroller software</a> |
<br> | <br> | ||
- | <a href="#Conclusion">4. | + | <a href="#Conclusion">4. Computer software</a> |
<br> | <br> | ||
</div> | </div> | ||
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<td width="10" rowspan=7 bgcolor="#222222"> | <td width="10" rowspan=7 bgcolor="#222222"> | ||
</div> | </div> | ||
- | + | <div id="windowbox" style="position:fixed; top:50%; left:20px; width:11%;"> | |
+ | <span style="color:ivory;"> | ||
+ | | ||
+ | <a href="https://2010.igem.org/Team:ESBS-Strasbourg/science"> | ||
+ | <img border="0" src="https://static.igem.org/mediawiki/2010/d/da/ESBS-Strasbourg-Clpx.gif" width="70" height="85" ></a> | ||
+ | <br> | ||
+ | Let me guide you</span> | ||
<td width="800" bgcolor="#414141"> | <td width="800" bgcolor="#414141"> | ||
<br> | <br> | ||
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<font size=+3>Lighting device</font> | <font size=+3>Lighting device</font> | ||
</center> | </center> | ||
+ | <br> | ||
+ | <center><img src="https://static.igem.org/mediawiki/2010/c/cd/Lightingdevice_top.png" width="450px"></center> | ||
+ | <br> | ||
<br> | <br> | ||
<a name="Introduction"></a> | <a name="Introduction"></a> | ||
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<div class="heading">1. Introduction</div> | <div class="heading">1. Introduction</div> | ||
<div class="desc"> | <div class="desc"> | ||
+ | <br> | ||
+ | <br> | ||
+ | To make the characterization of our biological system we developped a lighting device which can be controlled from a computer. The goal of this device is to create red and infrared pulses which period and duration are fixed by the user in a computer interface. | ||
+ | <br> | ||
+ | <br> | ||
+ | The lighting part of the device is composed of two parts: | ||
+ | <br> | ||
+ | • A LEDs band which is composed of four red LEDs put alternately with four infrared LEDs and used to enlighten a tube | ||
+ | <br> | ||
+ | • A box subdivided into a 3-by-3 matrix of compartments, each one containing a red and an infrared LED and used to enlighten independently nine biological materials | ||
+ | <br> | ||
+ | <br> | ||
+ | These two parts are represented on the following scheme: | ||
+ | <br> | ||
+ | <br> | ||
+ | <center><img src="https://static.igem.org/mediawiki/2010/e/e8/Leds_tot.png" width="500px"></center> | ||
+ | <br> | ||
<br> | <br> | ||
</div> | </div> | ||
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<a name="Behavioral"></a> | <a name="Behavioral"></a> | ||
<br> | <br> | ||
- | <div class="heading">2. | + | <div class="heading">2. Printed circuit board</div> |
<div class="desc"> | <div class="desc"> | ||
- | + | <br> | |
+ | <br> | ||
+ | We designed the printed circuit board with Kicad, a free PCB design tool. You can download Kicad at this address:<br> | ||
+ | <a href="http://www.lis.inpg.fr/realise_au_lis/kicad/">http://www.lis.inpg.fr/realise_au_lis/kicad/</a> | ||
+ | <br> | ||
+ | <br> | ||
+ | Here you can download the PCB file of the circuit: <center><a href="https://static.igem.org/mediawiki/2010/f/f5/LEDs_PCB.zip"><img src="https://static.igem.org/mediawiki/2010/e/e8/Download_bouton.png"></a></center> | ||
+ | <br> | ||
+ | <br> | ||
+ | The following picture explains the different components used: | ||
+ | <br> | ||
+ | <br> | ||
+ | <center><img src="https://static.igem.org/mediawiki/2010/0/08/LEDs_PCB_screen.png" width="750px"></center> | ||
+ | <br> | ||
+ | <br> | ||
+ | And here is the list of the corresponding components used: | ||
+ | <br> | ||
+ | <br> | ||
+ | • A1, A2, A3, B1, B2 , B3, C1, C2 and C3: LEDs connectors | ||
+ | <br> | ||
+ | • B1: LEDs band connector | ||
+ | <br> | ||
+ | • Q1: quartz 4 MHz | ||
+ | <br> | ||
+ | • PIC: Microchip PIC 18F452 | ||
+ | <br> | ||
+ | • MAX: MAX232 | ||
+ | <br> | ||
+ | • DB9: DB9 connector | ||
+ | <br> | ||
+ | • PB: reset button | ||
+ | <br> | ||
+ | • P1: power connector (9 V) | ||
+ | <br> | ||
+ | • P2: 78L05L voltage regulator (5 V) | ||
+ | <br> | ||
+ | • R1: LEDs resistors (100 Ω) | ||
+ | <br> | ||
+ | • RC1: resistor (10 kΩ) and capacitor (100 nF) for the reset | ||
+ | <br> | ||
+ | • C1: quartz capacitor (33 pF) | ||
+ | <br> | ||
+ | • C2: power decoupling capacitor (33 nF) | ||
+ | <br> | ||
+ | • C3,C4,C5,C6: MAX232 capacitors (10 µF) | ||
+ | <br> | ||
+ | • C7: 78L05L capacitor (330 nF) | ||
+ | <br> | ||
<br> | <br> | ||
</div> | </div> | ||
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<a name="Signalflow"></a> | <a name="Signalflow"></a> | ||
<br> | <br> | ||
- | <div class="heading">3. | + | <div class="heading">3. Microcontroller software</div> |
<div class="desc"> | <div class="desc"> | ||
- | + | <br> | |
+ | <br> | ||
+ | The microcontroller used is a Microchip pic 18F452 which is easily programmable in C language with MPLAB combined to a C18 compiler. The link between the computer and the microcontroller is carried through the serial port. | ||
+ | <br> | ||
+ | <br> | ||
+ | Here you can download the hex file of the program: <center><a href="https://static.igem.org/mediawiki/2010/6/63/Pic_LEDs.zip"><img src="https://static.igem.org/mediawiki/2010/e/e8/Download_bouton.png"></a></center> | ||
+ | <br> | ||
+ | <br> | ||
+ | And here are the source files of the software: <center><a href="https://static.igem.org/mediawiki/2010/2/2d/Pic_LEDs_sources.zip"><img src="https://static.igem.org/mediawiki/2010/e/e8/Download_bouton.png"></a></center> | ||
+ | <br> | ||
+ | <br> | ||
</div> | </div> | ||
</td> | </td> | ||
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<a name="Conclusion"></a> | <a name="Conclusion"></a> | ||
<br> | <br> | ||
- | <div class="heading">4. | + | <div class="heading">4. Computer software</div> |
<div class="desc"> | <div class="desc"> | ||
+ | <br> | ||
+ | <br> | ||
+ | We developped the computer software with Microsoft Visual C++. You can download Express version at this address: | ||
+ | <br> | ||
+ | <a href="http://msdn.microsoft.com/fr-fr/express/default.aspx">http://msdn.microsoft.com/fr-fr/express/default.aspx</a> | ||
+ | <br> | ||
+ | <br> | ||
+ | The following picture illustrates the software interface: | ||
+ | <br> | ||
+ | <br> | ||
+ | <center><img src="https://static.igem.org/mediawiki/2010/1/11/Soft_screen.png" width="750px"></center> | ||
+ | <br> | ||
+ | <br> | ||
+ | Here you can download the software: <center><a href="https://static.igem.org/mediawiki/2010/e/e9/Prog_LEDs.zip"><img src="https://static.igem.org/mediawiki/2010/e/e8/Download_bouton.png"></a></center> | ||
+ | <br> | ||
+ | <br> | ||
+ | And here are the source files: <center><a href="https://static.igem.org/mediawiki/2010/7/79/Prog_LEDs_sources.zip"><img src="https://static.igem.org/mediawiki/2010/e/e8/Download_bouton.png"></a></center> | ||
<br> | <br> | ||
<br> | <br> |
Latest revision as of 16:35, 27 October 2010
{|
>
2. Printed circuit board
We designed the printed circuit board with Kicad, a free PCB design tool. You can download Kicad at this address: http://www.lis.inpg.fr/realise_au_lis/kicad/ Here you can download the PCB file of the circuit: The following picture explains the different components used: And here is the list of the corresponding components used: • A1, A2, A3, B1, B2 , B3, C1, C2 and C3: LEDs connectors • B1: LEDs band connector • Q1: quartz 4 MHz • PIC: Microchip PIC 18F452 • MAX: MAX232 • DB9: DB9 connector • PB: reset button • P1: power connector (9 V) • P2: 78L05L voltage regulator (5 V) • R1: LEDs resistors (100 Ω) • RC1: resistor (10 kΩ) and capacitor (100 nF) for the reset • C1: quartz capacitor (33 pF) • C2: power decoupling capacitor (33 nF) • C3,C4,C5,C6: MAX232 capacitors (10 µF) • C7: 78L05L capacitor (330 nF) |
3. Microcontroller software
The microcontroller used is a Microchip pic 18F452 which is easily programmable in C language with MPLAB combined to a C18 compiler. The link between the computer and the microcontroller is carried through the serial port. Here you can download the hex file of the program: And here are the source files of the software: |
4. Computer software
We developped the computer software with Microsoft Visual C++. You can download Express version at this address: http://msdn.microsoft.com/fr-fr/express/default.aspx The following picture illustrates the software interface: Here you can download the software: And here are the source files: |