Team:BIOTEC Dresden/Software


Revision as of 00:50, 28 October 2010 by Mareike (Talk | contribs)

Name Description Link
ApE ApE was used as DNA construction software to create plasmid maps, fusion constructs and to view restriction sites of commonly used endonucleases
NCBI Blast The online software tool blast was used both to check nucleotide and protein sequences towards their homology to the original genomic sequence
Cell Designer Cell Designer represents a tool for molecular modeling allowing to construct molecular circuits
PartsRegistry Sequence Analysis/BLAST The registry blast was useful to identify nucleotide sequences already submitted to the registry
PlasmaDNA PlasmaDNA was used as a specific tool for the simulation of restriction digests as well as PCR reactions
Sequencher Sequencer helped to analyze the sequencing results obtained
Oligo Analyzer Properties such as Tm, dimerization and secondary structures of designed primers were checked.
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